Search Results for author: Aaron A. King

Found 3 papers, 3 papers with code

Exact phylodynamic likelihood via structured Markov genealogy processes

2 code implementations27 May 2024 Aaron A. King, Qianying Lin, Edward L. Ionides

We consider genealogies arising from a Markov population process in which individuals are categorized into a discrete collection of compartments, with the requirement that individuals within the same compartment are statistically exchangeable.

A tutorial on spatiotemporal partially observed Markov process models via the R package spatPomp

1 code implementation4 Jan 2021 Kidus Asfaw, Joonha Park, Allister Ho, Aaron A. King, Edward Ionides

A model of this form is called a spatiotemporal partially observed Markov process (SpatPOMP).

Methodology Computation

Time series analysis via mechanistic models

1 code implementation31 Jan 2008 Carles Bretó, Daihai He, Edward L. Ionides, Aaron A. King

We introduce a class of implicitly specified Markov chains with stochastic transition rates, and we demonstrate its applicability to open problems in statistical inference for biological systems.

Statistics Theory Statistics Theory

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