no code implementations • 28 May 2025 • Aravind R. Krishnan, Thomas Z. Li, Lucas W. Remedios, Michael E. Kim, Chenyu Gao, Gaurav Rudravaram, Elyssa M. McMaster, Adam M. Saunders, Shunxing Bao, Kaiwen Xu, Lianrui Zuo, Kim L. Sandler, Fabien Maldonado, Yuankai Huo, Bennett A. Landman
We propose a multipath cycleGAN model for CT kernel harmonization, trained on a mixture of paired and unpaired data from a low-dose lung cancer screening cohort.
no code implementations • 7 Feb 2025 • Aravind R. Krishnan, Yihao Liu, Kaiwen Xu, Michael E. Kim, Lucas W. Remedios, Gaurav Rudravaram, Adam M. Saunders, Bradley W. Richmond, Kim L. Sandler, Fabien Maldonado, Bennett A. Landman, Lianrui Zuo
Results show harmonization significantly reduces emphysema measurement inconsistencies, decreasing median emphysema scores from 10. 479% to 3. 039%, with a reference median score of 1. 305% from the STANDARD kernel as the target.
1 code implementation • 29 Oct 2024 • Chenyu Gao, Michael E. Kim, Karthik Ramadass, Praitayini Kanakaraj, Aravind R. Krishnan, Adam M. Saunders, Nancy R. Newlin, Ho Hin Lee, Qi Yang, Warren D. Taylor, Brian D. Boyd, Lori L. Beason-Held, Susan M. Resnick, Lisa L. Barnes, David A. Bennett, Katherine D. Van Schaik, Derek B. Archer, Timothy J. Hohman, Angela L. Jefferson, Ivana Išgum, Daniel Moyer, Yuankai Huo, Kurt G. Schilling, Lianrui Zuo, Shunxing Bao, Nazirah Mohd Khairi, Zhiyuan Li, Christos Davatzikos, Bennett A. Landman
We observe difference between our dMRI-based brain age and T1w MRI-based brain age across stages of neurodegeneration, with dMRI-based brain age being older than T1w MRI-based brain age in participants transitioning from cognitively normal (CN) to mild cognitive impairment (MCI), but younger in participants already diagnosed with Alzheimer's disease (AD).
no code implementations • 26 Sep 2024 • Elyssa M. McMaster, Nancy R. Newlin, Chloe Cho, Gaurav Rudravaram, Adam M. Saunders, Aravind R. Krishnan, Lucas W. Remedios, Michael E. Kim, Hanliang Xu, Kurt G. Schilling, François Rheault, Laurie E. Cutting, Bennett A. Landman
This study uses microstructural measures (fractional anisotropy and mean diffusivity) and white matter bundle properties (bundle volume, length, and surface area) to further understand the effect of anisotropic voxels on microstructure and tractography.
no code implementations • 20 Sep 2024 • Adam M. Saunders, Michael E. Kim, Chenyu Gao, Lucas W. Remedios, Aravind R. Krishnan, Kurt G. Schilling, Kristin P. O'Grady, Seth A. Smith, Bennett A. Landman
We demonstrate a tissue-dependent bias between MAP MP2RAGE T1 estimates and the multi-TI inversion recovery T1 values.
1 code implementation • 6 Sep 2024 • Lucas W. Remedios, Han Liu, Samuel W. Remedios, Lianrui Zuo, Adam M. Saunders, Shunxing Bao, Yuankai Huo, Alvin C. Powers, John Virostko, Bennett A. Landman
We trained a collection of basic UNets with different fusion points, spanning from early to late, to assess how early through late fusion influenced segmentation performance on imperfectly aligned images.
no code implementations • 5 Jan 2024 • Ho Hin Lee, Adam M. Saunders, Michael E. Kim, Samuel W. Remedios, Lucas W. Remedios, Yucheng Tang, Qi Yang, Xin Yu, Shunxing Bao, Chloe Cho, Louise A. Mawn, Tonia S. Rex, Kevin L. Schey, Blake E. Dewey, Jeffrey M. Spraggins, Jerry L. Prince, Yuankai Huo, Bennett A. Landman
These variations limit the feasibility and robustness of generalizing population-wise features of eye organs to an unbiased spatial reference.