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Found 19 papers, 4 papers with code
UWarp: A Whole Slide Image Registration Pipeline to Characterize Scanner-Induced Local Domain Shift
Histopathology slide digitization introduces scanner-induced domain shift that can significantly impact computational pathology models based on deep learning methods.
Computer-aided shape features extraction and regression models for predicting the ascending aortic aneurysm growth rate
In this study, we evaluate and compare the ability of local and global shape features to predict ascending aortic aneurysm growth.
Automatic quantification of breast cancer biomarkers from multiple 18F-FDG PET image segmentation
After fine-tuning, the model demonstrated a DSC of 0. 78 and a HD of 4. 95 mm on PET_Fu exams.
MedShapeNet -- A Large-Scale Dataset of 3D Medical Shapes for Computer Vision
For the medical domain, we present a large collection of anatomical shapes (e. g., bones, organs, vessels) and 3D models of surgical instrument, called MedShapeNet, created to facilitate the translation of data-driven vision algorithms to medical applications and to adapt SOTA vision algorithms to medical problems.
Deep Learning methods for automatic evaluation of delayed enhancement-MRI. The results of the EMIDEC challenge
The publicly available database consists of 150 exams divided into 50 cases with normal MRI after injection of a contrast agent and 100 cases with myocardial infarction (and then with a hyperenhanced area on DE-MRI), whatever their inclusion in the cardiac emergency department.
Deep Learning Based Cardiac MRI Segmentation: Do We Need Experts?
Results reveal that generalization performances of a segmentation neural network trained on non-expert groundtruth data is, to all practical purposes, as good as on expert groundtruth data, in particular when the non-expert gets a decent level of training, highlighting an opportunity for the efficient and cheap creation of annotations for cardiac datasets.
GANs for Medical Image Synthesis: An Empirical Study
The top-performing GANs are capable of generating realistic-looking medical images by FID standards that can fool trained experts in a visual Turing test and comply to some metrics.
Ranked #3 on
Medical Image Generation
on ACDC
Learning With Context Feedback Loop for Robust Medical Image Segmentation
Therefore, formulating image segmentation as a recurrent framework of two interconnected networks via context feedback loop can be a potential method for robust and efficient medical image analysis.
Automatic Myocardial Infarction Evaluation from Delayed-Enhancement Cardiac MRI using Deep Convolutional Networks
The second network is used to segment the pathological areas such as myocardial infarction, myocardial no-reflow, and normal myocardial region.
Segmentation-free Estimation of Aortic Diameters from MRI Using Deep Learning
Our approach makes use of a 3D+2D convolutional neural network (CNN) that takes as input a 3D scan and outputs the aortic diameter at a given location.
Cardiac Segmentation with Strong Anatomical Guarantees
In this paper, we present a framework for producing cardiac image segmentation maps that are guaranteed to respect pre-defined anatomical criteria, while remaining within the inter-expert variability.
Segmentation of the Myocardium on Late-Gadolinium Enhanced MRI based on 2.5 D Residual Squeeze and Excitation Deep Learning Model
The proposed model could be used for the automatic segmentation of myocardial border that is a very important step for accurate quantification of no-reflow, myocardial infarction, myocarditis, and hypertrophic cardiomyopathy, among others.
On the effectiveness of GAN generated cardiac MRIs for segmentation
On one side of our model is a Variational Autoencoder (VAE) trained to learn the latent representations of cardiac shapes.
Deep generative model-driven multimodal prostate segmentation in radiotherapy
We show that generative neural networkbased shape modeling trained on a reliable contrast imaging modality (such as MRI) can be directly applied to low contrast imaging modality (such as CT) to achieve accurate prostate segmentation.
3D landmark detection for augmented reality based otologic procedures
Ear consists of the smallest bones in the human body and does not contain significant amount of distinct landmark points that may be used to register a preoperative CT-scan with the surgical video in an augmented reality framework.
Cardiac MRI Segmentation with Strong Anatomical Guarantees
In this paper, we propose a cardiac MRI segmentation method which always produces anatomically plausible results.
Myocardial Infarction Quantification From Late Gadolinium Enhancement MRI Using Top-hat Transforms and Neural Networks
Although the technique accurately reflects the damaged tissue, there is no clinical standard for quantifying myocardial infarction (MI), demanding most algorithms to be expert dependent.
GridNet with automatic shape prior registration for automatic MRI cardiac segmentation
In this paper, we propose a fully automatic MRI cardiac segmentation method based on a novel deep convolutional neural network (CNN) designed for the 2017 ACDC MICCAI challenge.
MRI-PET Registration with Automated Algorithm in Pre-clinical Studies
Magnetic Resonance Imaging (MRI) and Positron Emission Tomography (PET) automatic 3-D registration is implemented and validated for small animal image volumes so that the high-resolution anatomical MRI information can be fused with the low spatial resolution of functional PET information for the localization of lesion that is currently in high demand in the study of tumor of cancer (oncology) and its corresponding preparation of pharmaceutical drugs.
