Search Results for author: Alvis Brazma

Found 4 papers, 1 papers with code

Putative cell type discovery from single-cell gene expression data

1 code implementation21 Apr 2020 Zhichao Miao, Pablo Moreno, Ni Huang, Irene Papatheodorou, Alvis Brazma, Sarah A Teichmann

We present a novel method for automated identification of putative cell types from single-cell RNA-seq (scRNA-seq) data.

Modelling-based experiment retrieval: A case study with gene expression clustering

no code implementations19 May 2015 Paul Blomstedt, Ritabrata Dutta, Sohan Seth, Alvis Brazma, Samuel Kaski

For retrieval of gene expression experiments, we use a probabilistic model called product partition model, which induces a clustering of genes that show similar expression patterns across a number of samples.

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