Image Registration of In Vivo Micro-Ultrasound and Ex Vivo Pseudo-Whole Mount Histopathology Images of the Prostate: A Proof-of-Concept Study

no code implementations • 31 May 2023 • Muhammad Imran, Brianna Nguyen, Jake Pensa, Sara M. Falzarano, Anthony E. Sisk, Muxuan Liang, John Michael DiBianco, Li-Ming Su, Yuyin Zhou, Wayne G. Brisbane, Wei Shao

Our pipeline begins with the reconstruction of pseudo-whole-mount histopathology images and a 3-dimensional (3D) micro-US volume.

Image Registration

Deep learning-based transformation of the H&E stain into special stains

no code implementations • 20 Aug 2020 • Kevin de Haan, Yijie Zhang, Jonathan E. Zuckerman, Tairan Liu, Anthony E. Sisk, Miguel F. P. Diaz, Kuang-Yu Jen, Alexander Nobori, Sofia Liou, Sarah Zhang, Rana Riahi, Yair Rivenson, W. Dean Wallace, Aydogan Ozcan

Based on evaluation by three renal pathologists, followed by adjudication by a fourth renal pathologist, we show that the generation of virtual special stains from existing H&E images improves the diagnosis in several non-neoplastic kidney diseases sampled from 58 unique subjects.