1 code implementation • 13 May 2024 • Artemy Kolchinsky
The partial information decomposition (PID) aims to quantify the amount of redundant information that a set of sources provides about a target.
no code implementations • 22 Aug 2023 • OoLEN, Silke Asche, Carla Bautista, David Boulesteix, Alexandre Champagne-Ruel, Cole Mathis, Omer Markovitch, Zhen Peng, Alyssa Adams, Avinash Vicholous Dass, Arnaud Buch, Eloi Camprubi, Enrico Sandro Colizzi, Stephanie Colón-Santos, Hannah Dromiack, Valentina Erastova, Amanda Garcia, Ghjuvan Grimaud, Aaron Halpern, Stuart A Harrison, Seán F. Jordan, Tony Z Jia, Amit Kahana, Artemy Kolchinsky, Odin Moron-Garcia, Ryo Mizuuchi, Jingbo Nan, Yuliia Orlova, Ben K. D. Pearce, Klaus Paschek, Martina Preiner, Silvana Pinna, Eduardo Rodríguez-Román, Loraine Schwander, Siddhant Sharma, Harrison B. Smith, Andrey Vieira, Joana C. Xavier
The sheer number of different scientific perspectives relevant to the problem has resulted in the coexistence of diverse tools, techniques, data, and software in OoL studies.
no code implementations • 6 Dec 2021 • Artemy Kolchinsky
We consider the relationship between thermodynamics, fitness, and Darwinian evolution in autocatalytic molecular replicators.
no code implementations • 31 Aug 2020 • Forrest C. Sheldon, Artemy Kolchinsky, Francesco Caravelli
By introducing measures of the total linear and nonlinear computational capacities of the reservoir, we are able to design electronic circuits whose total computational capacity scales extensively with the system size.
1 code implementation • 23 Aug 2019 • Artemy Kolchinsky
We consider the "partial information decomposition" (PID) problem, which aims to decompose the information that a set of source random variables provide about a target random variable into separate redundant, synergistic, union, and unique components.
no code implementations • 21 Mar 2019 • Artemy Kolchinsky, Bernat Corominas-Murtra
In many real-world systems, information can be transmitted in two qualitatively different ways: by copying or by transformation.
1 code implementation • ICLR 2019 • Artemy Kolchinsky, Brendan D. Tracey, Steven Van Kuyk
We demonstrate three caveats when using IB in any situation where $Y$ is a deterministic function of $X$: (1) the IB curve cannot be recovered by maximizing the IB Lagrangian for different values of $\beta$; (2) there are "uninteresting" trivial solutions at all points of the IB curve; and (3) for multi-layer classifiers that achieve low prediction error, different layers cannot exhibit a strict trade-off between compression and prediction, contrary to a recent proposal.
1 code implementation • ICLR 2018 • Andrew Michael Saxe, Yamini Bansal, Joel Dapello, Madhu Advani, Artemy Kolchinsky, Brendan Daniel Tracey, David Daniel Cox
The practical successes of deep neural networks have not been matched by theoretical progress that satisfyingly explains their behavior.
1 code implementation • 26 Jun 2017 • Artemy Kolchinsky, Nakul Dhande, Kengjeun Park, Yong-Yeol Ahn
We investigate the association between musical chords and lyrics by analyzing a large dataset of user-contributed guitar tablatures.
no code implementations • 8 Jun 2017 • Artemy Kolchinsky, Brendan D. Tracey
We prove this family includes lower and upper bounds on the mixture entropy.
3 code implementations • 6 May 2017 • Artemy Kolchinsky, Brendan D. Tracey, David H. Wolpert
Information bottleneck (IB) is a technique for extracting information in one random variable $X$ that is relevant for predicting another random variable $Y$.
1 code implementation • 7 Apr 2016 • Andrew Berdahl, Christa Brelsford, Caterina De Bacco, Marion Dumas, Vanessa Ferdinand, Joshua A. Grochow, Laurent Hébert-Dufresne, Yoav Kallus, Christopher P. Kempes, Artemy Kolchinsky, Daniel B. Larremore, Eric Libby, Eleanor A. Power, Caitlin A. Stern, Brendan Tracey
Third, in the context of dynamic social networks, we find that preferences for increased global infection accelerate spread and produce superexponential fixation, but preferences for local assortativity halt epidemics by disconnecting the infected from the susceptible.
Physics and Society Multiagent Systems Social and Information Networks Adaptation and Self-Organizing Systems Populations and Evolution
1 code implementation • 15 Sep 2015 • Artemy Kolchinsky, Alexander J. Gates, Luis M. Rocha
We propose a method to decompose dynamical systems based on the idea that modules constrain the spread of perturbations.
Physics and Society Social and Information Networks Adaptation and Self-Organizing Systems Data Analysis, Statistics and Probability
no code implementations • 2 Dec 2014 • Artemy Kolchinsky, Anália Lourenço, Heng-Yi Wu, Lang Li, Luis M. Rocha
We used manually curated corpora of PubMed abstracts and annotated sentences to evaluate the efficacy of literature mining on two tasks: first, identifying PubMed abstracts containing pharmacokinetic evidence of DDIs; second, extracting sentences containing such evidence from abstracts.
no code implementations • 19 Jun 2011 • Artemy Kolchinsky, Luis M. Rocha
Identifying and understanding modular organizations is centrally important in the study of complex systems.