1 code implementation • Findings (EMNLP) 2021 • Mourad Sarrouti, Asma Ben Abacha, Yassine Mrabet, Dina Demner-Fushman
Our experiments showed that training deep learning models on real-world medical claims greatly improves performance compared to models trained on synthetic and open-domain claims.
no code implementations • NAACL (BioNLP) 2021 • Asma Ben Abacha, Yassine Mrabet, Yuhao Zhang, Chaitanya Shivade, Curtis Langlotz, Dina Demner-Fushman
The MEDIQA 2021 shared tasks at the BioNLP 2021 workshop addressed three tasks on summarization for medical text: (i) a question summarization task aimed at exploring new approaches to understanding complex real-world consumer health queries, (ii) a multi-answer summarization task that targeted aggregation of multiple relevant answers to a biomedical question into one concise and relevant answer, and (iii) a radiology report summarization task addressing the development of clinically relevant impressions from radiology report findings.
1 code implementation • 26 Dec 2024 • Asma Ben Abacha, Wen-wai Yim, Yujuan Fu, Zhaoyi Sun, Meliha Yetisgen, Fei Xia, Thomas Lin
We also found that although recent LLMs have a good performance in error detection and correction, they are still outperformed by medical doctors in these tasks.
1 code implementation • 9 Oct 2024 • Noel C. F. Codella, Ying Jin, Shrey Jain, Yu Gu, Ho Hin Lee, Asma Ben Abacha, Alberto Santamaria-Pang, Will Guyman, Naiteek Sangani, Sheng Zhang, Hoifung Poon, Stephanie Hyland, Shruthi Bannur, Javier Alvarez-Valle, Xue Li, John Garrett, Alan McMillan, Gaurav Rajguru, Madhu Maddi, Nilesh Vijayrania, Rehaan Bhimai, Nick Mecklenburg, Rupal Jain, Daniel Holstein, Naveen Gaur, Vijay Aski, Jenq-Neng Hwang, Thomas Lin, Ivan Tarapov, Matthew Lungren, Mu Wei
Furthermore, MedImageInsight achieves human expert performance in bone age estimation (on both public and partner data), as well as AUC above 0. 9 in most other domains.
1 code implementation • 16 May 2024 • Johannes Rückert, Louise Bloch, Raphael Brüngel, Ahmad Idrissi-Yaghir, Henning Schäfer, Cynthia S. Schmidt, Sven Koitka, Obioma Pelka, Asma Ben Abacha, Alba G. Seco de Herrera, Henning Müller, Peter A. Horn, Felix Nensa, Christoph M. Friedrich
The dataset is suitable for training image annotation models based on image-caption pairs, or for multi-label image classification using Unified Medical Language System (UMLS) concepts provided with each image.
1 code implementation • 23 Nov 2023 • Asma Ben Abacha, Alberto Santamaria-Pang, Ho Hin Lee, Jameson Merkow, Qin Cai, Surya Teja Devarakonda, Abdullah Islam, Julia Gong, Matthew P. Lungren, Thomas Lin, Noel C Codella, Ivan Tarapov
The increasing use of medical imaging in healthcare settings presents a significant challenge due to the increasing workload for radiologists, yet it also offers opportunity for enhancing healthcare outcomes if effectively leveraged.
no code implementations • 3 Jun 2023 • Wen-wai Yim, Yujuan Fu, Asma Ben Abacha, Neal Snider, Thomas Lin, Meliha Yetisgen
Here we present the Ambient Clinical Intelligence Benchmark (ACI-BENCH) corpus, the largest dataset to date tackling the problem of AI-assisted note generation from visit dialogue.
1 code implementation • 27 May 2023 • Asma Ben Abacha, Wen-wai Yim, George Michalopoulos, Thomas Lin
To study the correlation between the automatic metrics and manual judgments, we evaluate automatic notes/summaries by comparing the system and reference facts and computing the factual correctness, and the hallucination and omission rates for critical medical facts.
1 code implementation • ACL 2021 • Shweta Yadav, Deepak Gupta, Asma Ben Abacha, Dina Demner-Fushman
The growth of online consumer health questions has led to the necessity for reliable and accurate question answering systems.
no code implementations • 1 Jun 2021 • Shweta Yadav, Deepak Gupta, Asma Ben Abacha, Dina Demner-Fushman
In this paper, we study the task of abstractive summarization for real-world consumer health questions.
1 code implementation • WS 2020 • Mourad Sarrouti, Asma Ben Abacha, Dina Demner-Fushman
Visual Question Generation (VQG), the task of generating a question based on image contents, is an increasingly important area that combines natural language processing and computer vision.
1 code implementation • 18 May 2020 • Max Savery, Asma Ben Abacha, Soumya Gayen, Dina Demner-Fushman
This dataset can be used to evaluate single or multi-document summaries generated by algorithms using extractive or abstractive approaches.
1 code implementation • WS 2019 • Asma Ben Abacha, Chaitanya Shivade, Dina Demner-Fushman
MEDIQA 2019 includes three tasks: Natural Language Inference (NLI), Recognizing Question Entailment (RQE), and Question Answering (QA) in the medical domain.
1 code implementation • ACL 2019 • Asma Ben Abacha, Dina Demner-Fushman
In this paper, we study neural abstractive models for medical question summarization.
3 code implementations • 23 Jan 2019 • Asma Ben Abacha, Dina Demner-Fushman
One of the challenges in large-scale information retrieval (IR) is to develop fine-grained and domain-specific methods to answer natural language questions.
no code implementations • Scientific Data 2018 • Jason J. Lau, Soumya Gayen, Asma Ben Abacha, Dina Demner-Fushman
We introduce VQA-RAD, the first manually constructed dataset where clinicians asked naturally occurring questions about radiology images and provided reference answers.
no code implementations • SEMEVAL 2017 • Asma Ben Abacha, Dina Demner-Fushman
Tested on cQA-B-2016 test data, our RQE system outperformed the best system of the 2016 challenge in all measures with 77. 47 MAP and 80. 57 Accuracy.
no code implementations • COLING 2016 • Suchet Chachra, Asma Ben Abacha, Sonya Shooshan, Laritza Rodriguez, Dina Demner-Fushman
Readers usually rely on abstracts to identify relevant medical information from scientific articles.
no code implementations • LREC 2016 • Halil Kilicoglu, Asma Ben Abacha, Yassine Mrabet, Kirk Roberts, Laritza Rodriguez, Sonya Shooshan, Dina Demner-Fushman
We describe a corpus of consumer health questions annotated with named entities.
no code implementations • JEPTALNRECITAL 2012 • Asma Ben Abacha, Pierre Zweigenbaum, Aur{\'e}lien Max