SPINEPS -- Automatic Whole Spine Segmentation of T2-weighted MR images using a Two-Phase Approach to Multi-class Semantic and Instance Segmentation

1 code implementation • 26 Feb 2024 • Hendrik Möller, Robert Graf, Joachim Schmitt, Benjamin Keinert, Matan Atad, Anjany Sekuboyina, Felix Streckenbach, Hanna Schön, Florian Kofler, Thomas Kroencke, Stefanie Bette, Stefan Willich, Thomas Keil, Thoralf Niendorf, Tobias Pischon, Beate Endemann, Bjoern Menze, Daniel Rueckert, Jan S. Kirschke

Training on auto-generated annotations and evaluating on manually corrected test data from the GNC yielded global dice scores of 0. 900 for vertebrae, 0. 960 for intervertebral discs, and 0. 947 for the spinal canal.

Instance Segmentation Segmentation +1