Cell type nomenclature for the mammalian brain: Development and application of a systematic, extensible convention

1 code implementation • 9 Jun 2020 • Jeremy A. Miller, Nathan W. Gouwens, Bosiljka Tasic, Forrest Collman, Cindy T. J. van Velthoven, Trygve E. Bakken, Hongkui Zeng, Ed S. Lein, Amy Bernard

The recent advent of single cell RNA-sequencing and other high-throughput technologies has led to an explosion of cell type definitions across multiple organ systems.

A coupled autoencoder approach for multi-modal analysis of cell types

1 code implementation • NeurIPS 2019 • Rohan Gala, Nathan Gouwens, Zizhen Yao, Agata Budzillo, Osnat Penn, Bosiljka Tasic, Gabe Murphy, Hongkui Zeng, Uygar Sümbül

Recent developments in high throughput profiling of individual neurons have spurred data driven exploration of the idea that there exist natural groupings of neurons referred to as cell types.

Clustering cross-modal alignment