no code implementations • 22 Aug 2024 • Jun Ma, Yao Zhang, Song Gu, Cheng Ge, Ershuai Wang, Qin Zhou, Ziyan Huang, Pengju Lyu, Jian He, Bo wang
Organ and cancer segmentation in abdomen Computed Tomography (CT) scans is the prerequisite for precise cancer diagnosis and treatment.
2 code implementations • 10 Aug 2023 • Jun Ma, Yao Zhang, Song Gu, Cheng Ge, Shihao Ma, Adamo Young, Cheng Zhu, Kangkang Meng, Xin Yang, Ziyan Huang, Fan Zhang, Wentao Liu, YuanKe Pan, Shoujin Huang, Jiacheng Wang, Mingze Sun, Weixin Xu, Dengqiang Jia, Jae Won Choi, Natália Alves, Bram de Wilde, Gregor Koehler, Yajun Wu, Manuel Wiesenfarth, Qiongjie Zhu, Guoqiang Dong, Jian He, the FLARE Challenge Consortium, Bo wang
The best-performing algorithms successfully generalized to holdout external validation sets, achieving a median DSC of 89. 5\%, 90. 9\%, and 88. 3\% on North American, European, and Asian cohorts, respectively.
no code implementations • 10 Aug 2023 • Jun Ma, Ronald Xie, Shamini Ayyadhury, Cheng Ge, Anubha Gupta, Ritu Gupta, Song Gu, Yao Zhang, Gihun Lee, Joonkee Kim, Wei Lou, Haofeng Li, Eric Upschulte, Timo Dickscheid, José Guilherme de Almeida, Yixin Wang, Lin Han, Xin Yang, Marco Labagnara, Vojislav Gligorovski, Maxime Scheder, Sahand Jamal Rahi, Carly Kempster, Alice Pollitt, Leon Espinosa, Tâm Mignot, Jan Moritz Middeke, Jan-Niklas Eckardt, Wangkai Li, Zhaoyang Li, Xiaochen Cai, Bizhe Bai, Noah F. Greenwald, David Van Valen, Erin Weisbart, Beth A. Cimini, Trevor Cheung, Oscar Brück, Gary D. Bader, Bo wang
This benchmark and the improved algorithm offer promising avenues for more accurate and versatile cell analysis in microscopy imaging.
no code implementations • 23 Nov 2022 • Cheng Ge, Han Zhang, Jiaoyang Li, Sven Koenig
Our theoretical results show that, when combined with either of these two new splitting strategies, MO-CBS maintains its completeness and optimality guarantees.
no code implementations • 10 Sep 2022 • Cheng Ge, Xi Chen, Ming Wang, Jin Wang
By using this deep network, we can easily locate the baseline position and then provide reliable and interpretable anomaly detection result.
no code implementations • 16 Mar 2022 • Cheng Ge, Yi Lu, Jia Qu, Liangxu Xie, Feng Wang, Hong Zhang, Ren Kong, Shan Chang
De novo peptide sequencing from mass spectrometry data is an important method for protein identification.
1 code implementation • 28 Oct 2020 • Jun Ma, Yao Zhang, Song Gu, Cheng Zhu, Cheng Ge, Yichi Zhang, Xingle An, Congcong Wang, Qiyuan Wang, Xin Liu, Shucheng Cao, Qi Zhang, Shangqing Liu, Yunpeng Wang, Yuhui Li, Jian He, Xiaoping Yang
With the unprecedented developments in deep learning, automatic segmentation of main abdominal organs seems to be a solved problem as state-of-the-art (SOTA) methods have achieved comparable results with inter-rater variability on many benchmark datasets.
2 code implementations • 27 Apr 2020 • Jun Ma, Yixin Wang, Xingle An, Cheng Ge, Ziqi Yu, Jianan Chen, Qiongjie Zhu, Guoqiang Dong, Jian He, Zhiqiang He, Yuntao Zhu, Ziwei Nie, Xiaoping Yang
Purpose: Accurate segmentation of lung and infection in COVID-19 CT scans plays an important role in the quantitative management of patients.