2 code implementations • 22 May 2020 • Payel Das, Tom Sercu, Kahini Wadhawan, Inkit Padhi, Sebastian Gehrmann, Flaviu Cipcigan, Vijil Chenthamarakshan, Hendrik Strobelt, Cicero dos Santos, Pin-Yu Chen, Yi Yan Yang, Jeremy Tan, James Hedrick, Jason Crain, Aleksandra Mojsilovic
De novo therapeutic design is challenged by a vast chemical repertoire and multiple constraints, e. g., high broad-spectrum potency and low toxicity.
1 code implementation • NeurIPS 2019 • Youssef Mroueh, Tom Sercu, Mattia Rigotti, Inkit Padhi, Cicero dos Santos
In the kernel version we show that SIC can be cast as a convex optimization problem by introducing auxiliary variables that play an important role in feature selection as they are normalized feature importance scores.
no code implementations • ICLR Workshop DeepGenStruct 2019 • Tom Sercu, Sebastian Gehrmann, Hendrik Strobelt, Payel Das, Inkit Padhi, Cicero dos Santos, Kahini Wadhawan, Vijil Chenthamarakshan
We present the pipeline in an interactive visual tool to enable the exploration of the metrics, analysis of the learned latent space, and selection of the best model for a given task.
1 code implementation • 13 Feb 2019 • Pierre Dognin, Igor Melnyk, Youssef Mroueh, Jerret Ross, Cicero dos Santos, Tom Sercu
In this paper we propose to perform model ensembling in a multiclass or a multilabel learning setting using Wasserstein (W.) barycenters.
no code implementations • 17 Oct 2018 • Payel Das, Kahini Wadhawan, Oscar Chang, Tom Sercu, Cicero dos Santos, Matthew Riemer, Vijil Chenthamarakshan, Inkit Padhi, Aleksandra Mojsilovic
Our model learns a rich latent space of the biological peptide context by taking advantage of abundant, unlabeled peptide sequences.
no code implementations • ACL 2017 • Mo Yu, Wenpeng Yin, Kazi Saidul Hasan, Cicero dos Santos, Bing Xiang, Bo-Wen Zhou
Relation detection is a core component for many NLP applications including Knowledge Base Question Answering (KBQA).
3 code implementations • 11 Feb 2016 • Cicero dos Santos, Ming Tan, Bing Xiang, Bo-Wen Zhou
In this work, we propose Attentive Pooling (AP), a two-way attention mechanism for discriminative model training.
Ranked #2 on Question Answering on SemEvalCQA
2 code implementations • 12 Nov 2015 • Ming Tan, Cicero dos Santos, Bing Xiang, Bo-Wen Zhou
One direction is to define a more composite representation for questions and answers by combining convolutional neural network with the basic framework.