no code implementations • 1 Nov 2024 • Sara Ketabi, Matthias W. Wagner, Cynthia Hawkins, Uri Tabori, Birgit Betina Ertl-Wagner, Farzad Khalvati
Despite the promising performance of convolutional neural networks (CNNs) in brain tumor diagnosis from magnetic resonance imaging (MRI), their integration into the clinical workflow has been limited.
no code implementations • 5 Feb 2024 • Khashayar Namdar, Matthias W. Wagner, Cynthia Hawkins, Uri Tabori, Birgit B. Ertl-Wagner, Farzad Khalvati
The baseline model was trained using binary cross entropy (BCE), and achieved an AUROC of 86. 11% for differentiating BRAF fusion and BRAF V600E mutations, which was improved to 87. 71% using our proposed AUROC loss function (p-value 0. 045).
no code implementations • 2 Oct 2023 • Meng Zhou, Matthias W Wagner, Uri Tabori, Cynthia Hawkins, Birgit B Ertl-Wagner, Farzad Khalvati
Research on deep learning-based brain tumor classification using MRI has shown that it is easier to classify the tumor ROIs compared to the entire image volumes.
no code implementations • 10 Nov 2022 • Jay J. Yoo, Khashayar Namdar, Matthias W. Wagner, Liana Nobre, Uri Tabori, Cynthia Hawkins, Birgit B. Ertl-Wagner, Farzad Khalvati
Segmentation of regions of interest (ROIs) for identifying abnormalities is a leading problem in medical imaging.
no code implementations • 13 Oct 2022 • Khashayar Namdar, Matthias W. Wagner, Kareem Kudus, Cynthia Hawkins, Uri Tabori, Brigit Ertl-Wagner, Farzad Khalvati
Conclusion: We achieved statistically significant improvements by incorporating tumor location into the CNN models.