Search Results for author: David Firmin

Found 20 papers, 3 papers with code

HDL: Hybrid Deep Learning for the Synthesis of Myocardial Velocity Maps in Digital Twins for Cardiac Analysis

2 code implementations9 Mar 2022 Xiaodan Xing, Javier Del Ser, Yinzhe Wu, Yang Li, Jun Xia, Lei Xu, David Firmin, Peter Gatehouse, Guang Yang

A core part of digital healthcare twins is model-based data synthesis, which permits the generation of realistic medical signals without requiring to cope with the modelling complexity of anatomical and biochemical phenomena producing them in reality.

Decision Making Generative Adversarial Network +1

Adaptive Hierarchical Dual Consistency for Semi-Supervised Left Atrium Segmentation on Cross-Domain Data

1 code implementation17 Sep 2021 Jun Chen, Heye Zhang, Raad Mohiaddin, Tom Wong, David Firmin, Jennifer Keegan, Guang Yang

For the inter-domain learning, a consistency constraint is applied to the LAs modelled by two dual-modelling networks to exploit the complementary knowledge among different data domains.

Left Atrium Segmentation Segmentation

Recent Advances in Fibrosis and Scar Segmentation from Cardiac MRI: A State-of-the-Art Review and Future Perspectives

no code implementations28 Jun 2021 Yinzhe Wu, Zeyu Tang, Binghuan Li, David Firmin, Guang Yang

Late Gadolinium enhancement (LGE) cardiovascular magnetic resonance (CMR) has been successful for its efficacy in guiding the clinical diagnosis and treatment reliably.

Segmentation

JAS-GAN: Generative Adversarial Network Based Joint Atrium and Scar Segmentations on Unbalanced Atrial Targets

no code implementations1 May 2021 Jun Chen, Guang Yang, Habib Khan, Heye Zhang, Yanping Zhang, Shu Zhao, Raad Mohiaddin, Tom Wong, David Firmin, Jennifer Keegan

In this paper, we propose an inter-cascade generative adversarial network, namely JAS-GAN, to segment the unbalanced atrial targets from LGE CMR images automatically and accurately in an end-to-end way.

Generative Adversarial Network Segmentation

Automated Multi-Channel Segmentation for the 4D Myocardial Velocity Mapping Cardiac MR

no code implementations16 Dec 2020 Yinzhe Wu, Suzan Hatipoglu, Diego Alonso-Álvarez, Peter Gatehouse, David Firmin, Jennifer Keegan, Guang Yang

Based on the results, our method provides compelling evidence for the design and application for the multi-channel image analysis of the 4D MVM CMR data.

Simultaneous Left Atrium Anatomy and Scar Segmentations via Deep Learning in Multiview Information with Attention

no code implementations2 Feb 2020 Guang Yang, Jun Chen, Zhifan Gao, Shuo Li, Hao Ni, Elsa Angelini, Tom Wong, Raad Mohiaddin, Eva Nyktari, Ricardo Wage, Lei Xu, Yanping Zhang, Xiuquan Du, Heye Zhang, David Firmin, Jennifer Keegan

Using our MVTT recursive attention model, both the LA anatomy and scar can be segmented accurately (mean Dice score of 93% for the LA anatomy and 87% for the scar segmentations) and efficiently (~0. 27 seconds to simultaneously segment the LA anatomy and scars directly from the 3D LGE CMR dataset with 60-68 2D slices).

Anatomy Segmentation

Discriminative Consistent Domain Generation for Semi-supervised Learning

no code implementations24 Jul 2019 Jun Chen, Heye Zhang, Yanping Zhang, Shu Zhao, Raad Mohiaddin, Tom Wong, David Firmin, Guang Yang, Jennifer Keegan

Based on the generated discriminative consistent domain, we can use the unlabeled data to learn the task model along with the labeled data via a consistent image generation.

Anatomy Domain Adaptation +1

Atrial Scar Quantification via Multi-scale CNN in the Graph-cuts Framework

no code implementations21 Feb 2019 Lei Li, Fuping Wu, Guang Yang, Lingchao Xu, Tom Wong, Raad Mohiaddin, David Firmin, Jennifer Keegan, Xiahai Zhuang

Compared with the conventional methods, which are based on the manual delineation of LA for initialization, our method is fully automatic and has demonstrated significantly better Dice score and accuracy (p < 0. 01).

Atrial fibrosis quantification based on maximum likelihood estimator of multivariate images

no code implementations22 Oct 2018 Fuping Wu, Lei LI, Guang Yang, Tom Wong, Raad Mohiaddin, David Firmin, Jennifer Keegan, Lingchao Xu, Xiahai Zhuang

We present a fully-automated segmentation and quantification of the left atrial (LA) fibrosis and scars combining two cardiac MRIs, one is the target late gadolinium-enhanced (LGE) image, and the other is an anatomical MRI from the same acquisition session.

Segmentation Texture Classification

Atrial scars segmentation via potential learning in the graph-cuts framework

no code implementations22 Oct 2018 Lei Li, Fuping Wu, Guang Yang, Tom Wong, Raad Mohiaddin, David Firmin, Jenny Keegan, Lingchao Xu, Xiahai Zhuang

Late Gadolinium Enhancement Magnetic Resonance Imaging (LGE MRI) emerged as a routine scan for patients with atrial fibrillation (AF).

Translational Motion Compensation for Soft Tissue Velocity Images

no code implementations20 Aug 2018 Christina Koutsoumpa, Jennifer Keegan, David Firmin, Guang-Zhong Yang, Duncan Gillies

Methods: Translational motion is estimated from a suitable region of velocities automatically defined in the left-ventricular volume.

Motion Compensation

Adversarial and Perceptual Refinement for Compressed Sensing MRI Reconstruction

1 code implementation28 Jun 2018 Maximilian Seitzer, Guang Yang, Jo Schlemper, Ozan Oktay, Tobias Würfl, Vincent Christlein, Tom Wong, Raad Mohiaddin, David Firmin, Jennifer Keegan, Daniel Rueckert, Andreas Maier

In addition, we introduce a semantic interpretability score, measuring the visibility of the region of interest in both ground truth and reconstructed images, which allows us to objectively quantify the usefulness of the image quality for image post-processing and analysis.

MRI Reconstruction Open-Ended Question Answering

Multiview Two-Task Recursive Attention Model for Left Atrium and Atrial Scars Segmentation

no code implementations12 Jun 2018 Jun Chen, Guang Yang, Zhifan Gao, Hao Ni, Elsa Angelini, Raad Mohiaddin, Tom Wong, Yanping Zhang, Xiuquan Du, Heye Zhang, Jennifer Keegan, David Firmin

Late Gadolinium Enhanced Cardiac MRI (LGE-CMRI) for detecting atrial scars in atrial fibrillation (AF) patients has recently emerged as a promising technique to stratify patients, guide ablation therapy and predict treatment success.

Anatomy Segmentation

Deep De-Aliasing for Fast Compressive Sensing MRI

no code implementations19 May 2017 Simiao Yu, Hao Dong, Guang Yang, Greg Slabaugh, Pier Luigi Dragotti, Xujiong Ye, Fangde Liu, Simon Arridge, Jennifer Keegan, David Firmin, Yike Guo

Fast Magnetic Resonance Imaging (MRI) is highly in demand for many clinical applications in order to reduce the scanning cost and improve the patient experience.

Compressive Sensing De-aliasing +1

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