Dual-Space Optimization: Improved Molecule Sequence Design by Latent Prompt Transformer

no code implementations • 27 Feb 2024 • Deqian Kong, Yuhao Huang, Jianwen Xie, Edouardo Honig, Ming Xu, Shuanghong Xue, Pei Lin, Sanping Zhou, Sheng Zhong, Nanning Zheng, Ying Nian Wu

Designing molecules with desirable properties, such as drug-likeliness and high binding affinities towards protein targets, is a challenging problem.

Differentiable VQ-VAE's for Robust White Matter Streamline Encodings

1 code implementation • 10 Nov 2023 • Andrew Lizarraga, Brandon Taraku, Edouardo Honig, Ying Nian Wu, Shantanu H. Joshi

Given the complex geometry of white matter streamlines, Autoencoders have been proposed as a dimension-reduction tool to simplify the analysis streamlines in a low-dimensional latent spaces.

Dimensionality Reduction