no code implementations • 30 Apr 2025 • Eloy Geenjaar, Vince Calhoun
To test this, we apply the framework to temporally unstructured resting-state fMRI data from individuals with schizophrenia and healthy controls.
no code implementations • 16 Dec 2024 • Eloy Geenjaar, Lie Lu
In this paper, we propose a new convolution-transformer hybrid model architecture with masked auto-encoding for low-data bio-signal transfer learning, introduce a frequency-based masked auto-encoding task, employ a more comprehensive evaluation framework, and evaluate how much and when (multimodal) pre-training improves fine-tuning performance.
no code implementations • 18 May 2023 • Eloy Geenjaar, Donghyun Kim, Riyasat Ohib, Marlena Duda, Amrit Kashyap, Sergey Plis, Vince Calhoun
We evaluate our approach on various task-fMRI datasets, including motor, working memory, and relational processing tasks, and demonstrate that it outperforms widely used dimensionality reduction techniques in how well the latent timeseries relates to behavioral sub-tasks, such as left-hand or right-hand tapping.
no code implementations • 7 Oct 2022 • Eloy Geenjaar, Noah Lewis, Amrit Kashyap, Robyn Miller, Vince Calhoun
To analyze communication, the brain is often split up into anatomical regions that each perform certain computations.
1 code implementation • 7 Sep 2022 • Alex Fedorov, Eloy Geenjaar, Lei Wu, Tristan Sylvain, Thomas P. DeRamus, Margaux Luck, Maria Misiura, R Devon Hjelm, Sergey M. Plis, Vince D. Calhoun
Coarse labels do not capture the long-tailed spectrum of brain disorder phenotypes, which leads to a loss of generalizability of the model that makes them less useful in diagnostic settings.
no code implementations • 26 May 2022 • Eloy Geenjaar, Amrit Kashyap, Noah Lewis, Robyn Miller, Vince Calhoun
Our approach is evaluated on data with multiple motor sub-tasks to assess whether the model captures disentangled latent factors that correspond to each sub-task.
no code implementations • 29 Aug 2021 • Eloy Geenjaar, Tonya White, Vince Calhoun
The VAE is trained on voxelwise rs-fMRI data and performs non-linear dimensionality reduction that retains meaningful information.
no code implementations • 3 May 2021 • Eloy Geenjaar, Noah Lewis, Zening Fu, Rohan Venkatdas, Sergey Plis, Vince Calhoun
Neuroimaging studies often involve the collection of multiple data modalities.
1 code implementation • 29 Mar 2021 • Alex Fedorov, Eloy Geenjaar, Lei Wu, Thomas P. DeRamus, Vince D. Calhoun, Sergey M. Plis
We show that self-supervised models are not as robust as expected based on their results in natural imaging benchmarks and can be outperformed by supervised learning with dropout.
1 code implementation • 25 Dec 2020 • Alex Fedorov, Tristan Sylvain, Eloy Geenjaar, Margaux Luck, Lei Wu, Thomas P. DeRamus, Alex Kirilin, Dmitry Bleklov, Vince D. Calhoun, Sergey M. Plis
Sensory input from multiple sources is crucial for robust and coherent human perception.