no code implementations • 30 May 2024 • Jeffrey D. Rudie, Hui-Ming Lin, Robyn L. Ball, Sabeena Jalal, Luciano M. Prevedello, Savvas Nicolaou, Brett S. Marinelli, Adam E. Flanders, Kirti Magudia, George Shih, Melissa A. Davis, John Mongan, Peter D. Chang, Ferco H. Berger, Sebastiaan Hermans, Meng Law, Tyler Richards, Jan-Peter Grunz, Andreas Steven Kunz, Shobhit Mathur, Sandro Galea-Soler, Andrew D. Chung, Saif Afat, Chin-Chi Kuo, Layal Aweidah, Ana Villanueva Campos, Arjuna Somasundaram, Felipe Antonio Sanchez Tijmes, Attaporn Jantarangkoon, Leonardo Kayat Bittencourt, Michael Brassil, Ayoub El Hajjami, Hakan Dogan, Muris Becircic, Agrahara G. Bharatkumar, Eduardo Moreno Júdice de Mattos Farina, Dataset Curator Group, Dataset Contributor Group, Dataset Annotator Group, Errol Colak
The RSNA Abdominal Traumatic Injury CT (RATIC) dataset is the largest publicly available collection of adult abdominal CT studies annotated for traumatic injuries.
1 code implementation • 15 May 2023 • Florian Kofler, Felix Meissen, Felix Steinbauer, Robert Graf, Stefan K Ehrlich, Annika Reinke, Eva Oswald, Diana Waldmannstetter, Florian Hoelzl, Izabela Horvath, Oezguen Turgut, Suprosanna Shit, Christina Bukas, Kaiyuan Yang, Johannes C. Paetzold, Ezequiel de da Rosa, Isra Mekki, Shankeeth Vinayahalingam, Hasan Kassem, Juexin Zhang, Ke Chen, Ying Weng, Alicia Durrer, Philippe C. Cattin, Julia Wolleb, M. S. Sadique, M. M. Rahman, W. Farzana, A. Temtam, K. M. Iftekharuddin, Maruf Adewole, Syed Muhammad Anwar, Ujjwal Baid, Anastasia Janas, Anahita Fathi Kazerooni, Dominic LaBella, Hongwei Bran Li, Ahmed W Moawad, Gian-Marco Conte, Keyvan Farahani, James Eddy, Micah Sheller, Sarthak Pati, Alexandros Karagyris, Alejandro Aristizabal, Timothy Bergquist, Verena Chung, Russell Takeshi Shinohara, Farouk Dako, Walter Wiggins, Zachary Reitman, Chunhao Wang, Xinyang Liu, Zhifan Jiang, Elaine Johanson, Zeke Meier, Ariana Familiar, Christos Davatzikos, John Freymann, Justin Kirby, Michel Bilello, Hassan M Fathallah-Shaykh, Roland Wiest, Jan Kirschke, Rivka R Colen, Aikaterini Kotrotsou, Pamela Lamontagne, Daniel Marcus, Mikhail Milchenko, Arash Nazeri, Marc-André Weber, Abhishek Mahajan, Suyash Mohan, John Mongan, Christopher Hess, Soonmee Cha, Javier Villanueva-Meyer, Errol Colak, Priscila Crivellaro, Andras Jakab, Abiodun Fatade, Olubukola Omidiji, Rachel Akinola Lagos, O O Olatunji, Goldey Khanna, John Kirkpatrick, Michelle Alonso-Basanta, Arif Rashid, Miriam Bornhorst, Ali Nabavizadeh, Natasha Lepore, Joshua Palmer, Antonio Porras, Jake Albrecht, Udunna Anazodo, Mariam Aboian, Evan Calabrese, Jeffrey David Rudie, Marius George Linguraru, Juan Eugenio Iglesias, Koen van Leemput, Spyridon Bakas, Benedikt Wiestler, Ivan Ezhov, Marie Piraud, Bjoern H Menze
The challenge is organized as part of the ASNR-BraTS MICCAI challenge.
1 code implementation • 17 Apr 2023 • Kathryn Wantlin, Chenwei Wu, Shih-Cheng Huang, Oishi Banerjee, Farah Dadabhoy, Veeral Vipin Mehta, Ryan Wonhee Han, Fang Cao, Raja R. Narayan, Errol Colak, Adewole Adamson, Laura Heacock, Geoffrey H. Tison, Alex Tamkin, Pranav Rajpurkar
Finally, we evaluate performance on out-of-distribution data collected at different hospitals than the training data, representing naturally-occurring distribution shifts that frequently degrade the performance of medical AI models.
no code implementations • 23 Mar 2023 • Edward H. Lee, Brendan Kelly, Emre Altinmakas, Hakan Dogan, Maryam Mohammadzadeh, Errol Colak, Steve Fu, Olivia Choudhury, Ujjwal Ratan, Felipe Kitamura, Hernan Chaves, Jimmy Zheng, Mourad Said, Eduardo Reis, Jaekwang Lim, Patricia Yokoo, Courtney Mitchell, Golnaz Houshmand, Marzyeh Ghassemi, Ronan Killeen, Wendy Qiu, Joel Hayden, Farnaz Rafiee, Chad Klochko, Nicholas Bevins, Faeze Sazgara, S. Simon Wong, Michael Moseley, Safwan Halabi, Kristen W. Yeom
While it is well known that population differences from genetics, sex, race, and environmental factors contribute to disease, AI studies in medicine have largely focused on locoregional patient cohorts with less diverse data sources.
no code implementations • 24 Sep 2021 • Edward H. Lee, Mario Michael Krell, Alexander Tsyplikhin, Victoria Rege, Errol Colak, Kristen W. Yeom
We also provide two extensions: 1) DPSGD for pipelined models and 2) per-layer clipping that is 15x faster than the Opacus implementation on 8x A100s.
1 code implementation • 5 Jul 2021 • Ujjwal Baid, Satyam Ghodasara, Suyash Mohan, Michel Bilello, Evan Calabrese, Errol Colak, Keyvan Farahani, Jayashree Kalpathy-Cramer, Felipe C. Kitamura, Sarthak Pati, Luciano M. Prevedello, Jeffrey D. Rudie, Chiharu Sako, Russell T. Shinohara, Timothy Bergquist, Rong Chai, James Eddy, Julia Elliott, Walter Reade, Thomas Schaffter, Thomas Yu, Jiaxin Zheng, Ahmed W. Moawad, Luiz Otavio Coelho, Olivia McDonnell, Elka Miller, Fanny E. Moron, Mark C. Oswood, Robert Y. Shih, Loizos Siakallis, Yulia Bronstein, James R. Mason, Anthony F. Miller, Gagandeep Choudhary, Aanchal Agarwal, Cristina H. Besada, Jamal J. Derakhshan, Mariana C. Diogo, Daniel D. Do-Dai, Luciano Farage, John L. Go, Mohiuddin Hadi, Virginia B. Hill, Michael Iv, David Joyner, Christie Lincoln, Eyal Lotan, Asako Miyakoshi, Mariana Sanchez-Montano, Jaya Nath, Xuan V. Nguyen, Manal Nicolas-Jilwan, Johanna Ortiz Jimenez, Kerem Ozturk, Bojan D. Petrovic, Chintan Shah, Lubdha M. Shah, Manas Sharma, Onur Simsek, Achint K. Singh, Salil Soman, Volodymyr Statsevych, Brent D. Weinberg, Robert J. Young, Ichiro Ikuta, Amit K. Agarwal, Sword C. Cambron, Richard Silbergleit, Alexandru Dusoi, Alida A. Postma, Laurent Letourneau-Guillon, Gloria J. Guzman Perez-Carrillo, Atin Saha, Neetu Soni, Greg Zaharchuk, Vahe M. Zohrabian, Yingming Chen, Milos M. Cekic, Akm Rahman, Juan E. Small, Varun Sethi, Christos Davatzikos, John Mongan, Christopher Hess, Soonmee Cha, Javier Villanueva-Meyer, John B. Freymann, Justin S. Kirby, Benedikt Wiestler, Priscila Crivellaro, Rivka R. Colen, Aikaterini Kotrotsou, Daniel Marcus, Mikhail Milchenko, Arash Nazeri, Hassan Fathallah-Shaykh, Roland Wiest, Andras Jakab, Marc-Andre Weber, Abhishek Mahajan, Bjoern Menze, Adam E. Flanders, Spyridon Bakas
The BraTS 2021 challenge celebrates its 10th anniversary and is jointly organized by the Radiological Society of North America (RSNA), the American Society of Neuroradiology (ASNR), and the Medical Image Computing and Computer Assisted Interventions (MICCAI) society.
no code implementations • 9 Feb 2021 • Hojjat Salehinejad, Jumpei Kitamura, Noah Ditkofsky, Amy Lin, Aditya Bharatha, Suradech Suthiphosuwan, Hui-Ming Lin, Jefferson R. Wilson, Muhammad Mamdani, Errol Colak
An ML model was trained using 21, 784 scans from the RSNA Intracranial Hemorrhage CT dataset while generalizability was evaluated using an external validation dataset obtained from our busy trauma and neurosurgical center.
no code implementations • 26 Oct 2020 • Hojjat Salehinejad, Edward Ho, Hui-Ming Lin, Priscila Crivellaro, Oleksandra Samorodova, Monica Tafur Arciniegas, Zamir Merali, Suradech Suthiphosuwan, Aditya Bharatha, Kristen Yeom, Muhammad Mamdani, Jefferson Wilson, Errol Colak
Fractures of the cervical spine are a medical emergency and may lead to permanent paralysis and even death.
no code implementations • 24 Sep 2018 • Hojjat Salehinejad, Sumeya Naqvi, Errol Colak, Joseph Barfett, Shahrokh Valaee
The images generated from a cylindrical transform augment a limited annotated set of images in three dimensions.
no code implementations • 29 Dec 2017 • Hojjat Salehinejad, Sharan Sankar, Joseph Barfett, Errol Colak, Shahrokh Valaee
Recurrent neural networks (RNNs) are capable of learning features and long term dependencies from sequential and time-series data.
no code implementations • 8 Nov 2017 • Hojjat Salehinejad, Shahrokh Valaee, Tim Dowdell, Errol Colak, Joseph Barfett
Medical datasets are often highly imbalanced with over-representation of common medical problems and a paucity of data from rare conditions.
no code implementations • 24 Aug 2017 • Hojjat Salehinejad, Shahrokh Valaee, Aren Mnatzakanian, Tim Dowdell, Joseph Barfett, Errol Colak
Radiology reports are an important means of communication between radiologists and other physicians.
no code implementations • 7 Aug 2017 • Hojjat Salehinejad, Joseph Barfett, Parham Aarabi, Shahrokh Valaee, Errol Colak, Bruce Gray, Tim Dowdell
Pathfinding in hospitals is challenging for patients, visitors, and even employees.