no code implementations • 14 Oct 2024 • Robert Graf, Florian Hunecke, Soeren Pohl, Matan Atad, Hendrik Moeller, Sophie Starck, Thomas Kroencke, Stefanie Bette, Fabian Bamberg, Tobias Pischon, Thoralf Niendorf, Carsten Schmidt, Johannes C. Paetzold, Daniel Rueckert, Jan S Kirschke
Our findings highlight the potential of using advanced embedding techniques like DAEs to detect data quality issues and biases in medical imaging datasets.
1 code implementation • 31 May 2024 • Robert Graf, Paul-Sören Platzek, Evamaria Olga Riedel, Constanze Ramschütz, Sophie Starck, Hendrik Kristian Möller, Matan Atad, Henry Völzke, Robin Bülow, Carsten Oliver Schmidt, Julia Rüdebusch, Matthias Jung, Marco Reisert, Jakob Weiss, Maximilian Löffler, Fabian Bamberg, Bene Wiestler, Johannes C. Paetzold, Daniel Rueckert, Jan Stefan Kirschke
Objectives: To present a publicly available torso segmentation network for large epidemiology datasets on volumetric interpolated breath-hold examination (VIBE) images.
no code implementations • 23 May 2022 • Tobias Bernecker, Annette Peters, Christopher L. Schlett, Fabian Bamberg, Fabian Theis, Daniel Rueckert, Jakob Weiß, Shadi Albarqouni
One of the most common methods for analyzing CT and MRI images for diagnosis and follow-up treatment is liver segmentation.
1 code implementation • 16 Jul 2021 • Tim Hahn, Jan Ernsting, Nils R. Winter, Vincent Holstein, Ramona Leenings, Marie Beisemann, Lukas Fisch, Kelvin Sarink, Daniel Emden, Nils Opel, Ronny Redlich, Jonathan Repple, Dominik Grotegerd, Susanne Meinert, Jochen G. Hirsch, Thoralf Niendorf, Beate Endemann, Fabian Bamberg, Thomas Kröncke, Robin Bülow, Henry Völzke, Oyunbileg von Stackelberg, Ramona Felizitas Sowade, Lale Umutlu, Börge Schmidt, Svenja Caspers, German National Cohort Study Center Consortium, Harald Kugel, Tilo Kircher, Benjamin Risse, Christian Gaser, James H. Cole, Udo Dannlowski, Klaus Berger
The deviation between chronological age and age predicted from neuroimaging data has been identified as a sensitive risk-marker of cross-disorder brain changes, growing into a cornerstone of biological age-research.
1 code implementation • 22 Mar 2021 • Lukas Fisch, Jan Ernsting, Nils R. Winter, Vincent Holstein, Ramona Leenings, Marie Beisemann, Kelvin Sarink, Daniel Emden, Nils Opel, Ronny Redlich, Jonathan Repple, Dominik Grotegerd, Susanne Meinert, Niklas Wulms, Heike Minnerup, Jochen G. Hirsch, Thoralf Niendorf, Beate Endemann, Fabian Bamberg, Thomas Kröncke, Annette Peters, Robin Bülow, Henry Völzke, Oyunbileg von Stackelberg, Ramona Felizitas Sowade, Lale Umutlu, Börge Schmidt, Svenja Caspers, German National Cohort Study Center Consortium, Harald Kugel, Bernhard T. Baune, Tilo Kircher, Benjamin Risse, Udo Dannlowski, Klaus Berger, Tim Hahn
For comparison, state-of-the-art models using preprocessed neuroimaging data are trained and validated on the same samples.
1 code implementation • 5 Aug 2020 • Thomas Küstner, Tobias Hepp, Marc Fischer, Martin Schwartz, Andreas Fritsche, Hans-Ulrich Häring, Konstantin Nikolaou, Fabian Bamberg, Bin Yang, Fritz Schick, Sergios Gatidis, Jürgen Machann
Methods: Quantification and localization of different adipose tissue compartments from whole-body MR images is of high interest to examine metabolic conditions.
no code implementations • 25 Jun 2018 • Thomas Küstner, Sergios Gatidis, Annika Liebgott, Martin Schwartz, Lukas Mauch, Petros Martirosian, Holger Schmidt, Nina F. Schwenzer, Konstantin Nikolaou, Fabian Bamberg, Bin Yang, Fritz Schick
Therefore, the assessment or the ensurance of sufficient image quality in an automated manner is of high interest.