no code implementations • 9 Dec 2024 • Shanshan Wang, Shoujun Yu, Jian Cheng, Sen Jia, Changjun Tie, Jiayu Zhu, Haohao Peng, Yijing Dong, Jianzhong He, Fan Zhang, Yaowen Xing, Xiuqin Jia, Qi Yang, Qiyuan Tian, Hua Guo, Guobin Li, Hairong Zheng
Diffusion magnetic resonance imaging (dMRI) provides critical insights into the microstructural and connectional organization of the human brain.
no code implementations • 21 Nov 2024 • Yue Wang, Tian Zhou, Zhuo-Xu Cui, Bingsheng Huang, Hairong Zheng, Dong Liang, Yanjie Zhu
This study proposes an SB-based, multi-contrast image-guided reconstruction framework that establishes a diffusion bridge between the guiding and target image distributions.
no code implementations • 10 Nov 2024 • Taohui Xiao, Jian Cheng, Wenxin Fan, Enqing Dong, Hairong Zheng, Shanshan Wang
Neurite Orientation Dispersion and Density Imaging (NODDI) microstructure estimation from diffusion magnetic resonance imaging (dMRI) is of great significance for the discovery and treatment of various neurological diseases.
no code implementations • 12 Oct 2024 • Shuo Zhou, Yihang Zhou, Congcong Liu, Yanjie Zhu, Hairong Zheng, Dong Liang, Haifeng Wang
Magnetic resonance image reconstruction starting from undersampled k-space data requires the recovery of many potential nonlinear features, which is very difficult for algorithms to recover these features.
no code implementations • 8 Aug 2024 • Ling Lin, Yihang Zhou, Zhanqi Hu, Dian Jiang, Congcong Liu, Shuo Zhou, Yanjie Zhu, Jianxiang Liao, Dong Liang, Hairong Zheng, Haifeng Wang
Tuberous sclerosis complex (TSC) manifests as a multisystem disorder with significant neurological implications.
no code implementations • 24 May 2024 • Lang Zhang, Jinling He, Dong Liang, Hairong Zheng, Yanjie Zhu
Diff-DTI introduces a joint diffusion model that directly learns the joint probability distribution of DWIs with DTI parametric maps for conditional generation.
no code implementations • 6 May 2024 • Wenxin Fan, Jian Cheng, Cheng Li, Xinrui Ma, Jing Yang, Juan Zou, Ruoyou Wu, Zan Chen, Yuanjing Feng, Hairong Zheng, Shanshan Wang
Deep learning has emerged as a promising approach for learning the nonlinear mapping between diffusion-weighted MR images and tissue parameters, which enables automatic and deep understanding of the brain microstructures.
no code implementations • 11 Apr 2024 • Zeyu Zhang, Yuanshen Zhao, Jingxian Duan, Yaou Liu, Hairong Zheng, Dong Liang, Zhenyu Zhang, Zhi-Cheng Li
The PGHG consists of biological knowledge-guided representation learning network and pathology-genome heterogeneous graph.
1 code implementation • 5 Feb 2024 • Jiarun Liu, Hao Yang, Hong-Yu Zhou, Yan Xi, Lequan Yu, Yizhou Yu, Yong Liang, Guangming Shi, Shaoting Zhang, Hairong Zheng, Shanshan Wang
However, it is challenging for existing methods to model long-range global information, where convolutional neural networks (CNNs) are constrained by their local receptive fields, and vision transformers (ViTs) suffer from high quadratic complexity of their attention mechanism.
no code implementations • 21 Jan 2024 • Weijian Huang, Cheng Li, Hao Yang, Jiarun Liu, Yong Liang, Hairong Zheng, Shanshan Wang
Particularly, raw radiology reports are refined to highlight the key information according to a constructed clinical dictionary and two model-optimized knowledge-enhancement metrics.
1 code implementation • 4 Jan 2024 • Hao Yang, Hong-Yu Zhou, Jiarun Liu, Weijian Huang, Zhihuan Li, Yuanxu Gao, Cheng Li, Qiegen Liu, Yong Liang, Qi Yang, Song Wu, Tao Tan, Hairong Zheng, Kang Zhang, Shanshan Wang
Defining pathologies automatically from medical images aids the understanding of the emergence and progression of diseases, and such an ability is crucial in clinical diagnostics.
no code implementations • 3 Jan 2024 • Weijian Huang, Cheng Li, Hong-Yu Zhou, Jiarun Liu, Hao Yang, Yong Liang, Guangming Shi, Hairong Zheng, Shanshan Wang
The development of medical vision-language foundation models has attracted significant attention in the field of medicine and healthcare due to their promising prospect in various clinical applications.
no code implementations • 3 Jan 2024 • Hao Yang, Hong-Yu Zhou, Cheng Li, Weijian Huang, Jiarun Liu, Yong Liang, Guangming Shi, Hairong Zheng, Qiegen Liu, Shanshan Wang
Multimodal deep learning utilizing imaging and diagnostic reports has made impressive progress in the field of medical imaging diagnostics, demonstrating a particularly strong capability for auxiliary diagnosis in cases where sufficient annotation information is lacking.
1 code implementation • 7 Dec 2023 • Shibin Wu, Bang Yang, Zhiyu Ye, Haoqian Wang, Hairong Zheng, Tong Zhang
Medical report generation demands automatic creation of coherent and precise descriptions for medical images.
no code implementations • 7 Oct 2023 • Yuanyuan Liu, Zhuo-Xu Cui, Shucong Qin, Congcong Liu, Hairong Zheng, Haifeng Wang, Yihang Zhou, Dong Liang, Yanjie Zhu
Long scan time significantly hinders the widespread applications of three-dimensional multi-contrast cardiac magnetic resonance (3D-MC-CMR) imaging.
1 code implementation • 12 Sep 2023 • Weijian Huang, Cheng Li, Hong-Yu Zhou, Hao Yang, Jiarun Liu, Yong Liang, Hairong Zheng, Shaoting Zhang, Shanshan Wang
It designs a correlation weighting mechanism to adjust the correlation between masked chest X-ray image patches and their corresponding reports, thereby enhancing the model's representation learning capabilities.
no code implementations • 14 May 2023 • Xuebao Cai, Yuhang Tan, Ting Su, Dong Liang, Hairong Zheng, Jinyou Xu, Peiping Zhu, Yongshuai Ge
In conclusion, a novel model-driven nPCT image reconstruction algorithm with high accuracy and robustness is verified for the Lau interferometer based hard X-ray nano-resolution phase contrast imaging.
no code implementations • 10 May 2023 • Juan Zou, Cheng Li, Ruoyou Wu, Tingrui Pei, Hairong Zheng, Shanshan Wang
SSFedMRI explores the physics-based contrastive reconstruction networks in each client to realize cross-site collaborative training in the absence of fully sampled data.
1 code implementation • 15 Apr 2023 • Ruoyou Wu, Cheng Li, Juan Zou, Qiegen Liu, Hairong Zheng, Shanshan Wang
However, high heterogeneity exists in the data from different centers, and existing federated learning methods tend to use average aggregation methods to combine the client's information, which limits the performance and generalization capability of the trained models.
no code implementations • 11 Apr 2023 • Zhuo-Xu Cui, Chentao Cao, Yue Wang, Sen Jia, Jing Cheng, Xin Liu, Hairong Zheng, Dong Liang, Yanjie Zhu
To overcome this challenge, we introduce a novel approach called SPIRiT-Diffusion, which is a diffusion model for k-space interpolation inspired by the iterative self-consistent SPIRiT method.
no code implementations • 14 Dec 2022 • Chentao Cao, Zhuo-Xu Cui, Jing Cheng, Sen Jia, Hairong Zheng, Dong Liang, Yanjie Zhu
Diffusion model is the most advanced method in image generation and has been successfully applied to MRI reconstruction.
no code implementations • 24 Nov 2022 • Xue Liu, Juan Zou, Xiawu Zheng, Cheng Li, Hairong Zheng, Shanshan Wang
Then, we design an effective self-supervised training data refinement method to reduce this data bias.
no code implementations • 16 Nov 2022 • Cheng Li, Yousuf Babiker M. Osman, Weijian Huang, Zhenzhen Xue, Hua Han, Hairong Zheng, Shanshan Wang
Multi-parametric magnetic resonance (MR) imaging is an indispensable tool in the clinic.
no code implementations • 16 Nov 2022 • Yousuf Babiker M. Osman, Cheng Li, Weijian Huang, Nazik Elsayed, Zhenzhen Xue, Hairong Zheng, Shanshan Wang
The proposed framework is very useful in clinical applications when training data with dense annotations are difficult to obtain.
1 code implementation • 10 Aug 2022 • Chentao Cao, Zhuo-Xu Cui, Yue Wang, Shaonan Liu, Taijin Chen, Hairong Zheng, Dong Liang, Yanjie Zhu
Diffusion models with continuous stochastic differential equations (SDEs) have shown superior performances in image generation.
no code implementations • 8 Aug 2022 • Juan Zou, Cheng Li, Sen Jia, Ruoyou Wu, Tingrui Pei, Hairong Zheng, Shanshan Wang
Lately, deep learning has been extensively investigated for accelerating dynamic magnetic resonance (MR) imaging, with encouraging progresses achieved.
no code implementations • 5 Aug 2022 • Wei Dai, Ziyao Zhang, Lixia Tian, Shengyuan Yu, Shuhui Wang, Zhao Dong, Hairong Zheng
The low representation ability of FC leads to poor performance in clinical practice, especially when dealing with multimodal medical data involving multiple types of visual signals and textual records for brain diseases.
no code implementations • 18 Mar 2022 • Weijian Huang, Cheng Li, Wenxin Fan, Yongjin Zhou, Qiegen Liu, Hairong Zheng, Shanshan Wang
Recovering high-quality images from undersampled measurements is critical for accelerated MRI reconstruction.
1 code implementation • 3 Feb 2022 • Shanshan Wang, Ruoyou Wu, Cheng Li, Juan Zou, Ziyao Zhang, Qiegen Liu, Yan Xi, Hairong Zheng
However, in the absence of high-quality, fully sampled datasets for training, the performance of these methods is limited.
no code implementations • 8 Jan 2022 • Yeqi Wang, Longfei Li, Cheng Li, Yan Xi, Hairong Zheng, Yusong Lin, Shanshan Wang
Geometric manifolds of hand-crafted features and learned features are constructed to mine the implicit relationship between deep learning and radiomics, and therefore to dig mutual consent and essential representation for the glioma grades.
no code implementations • 23 Dec 2021 • Longfei Li, Rui Yang, Xin Chen, Cheng Li, Hairong Zheng, Yusong Lin, Zaiyi Liu, Shanshan Wang
Prostate Imaging Reporting and Data System (PI-RADS) based on multi-parametric MRI classi\^ees patients into 5 categories (PI-RADS 1-5) for routine clinical diagnosis guidance.
1 code implementation • 26 Sep 2021 • Chen Hu, Cheng Li, Haifeng Wang, Qiegen Liu, Hairong Zheng, Shanshan Wang
Specifically, during model optimization, two subsets are constructed by randomly selecting part of k-space data from the undersampled data and then fed into two parallel reconstruction networks to perform information recovery.
no code implementations • 13 Jul 2021 • Kehan Qi, Haoran Li, Chuyu Rong, Yu Gong, Cheng Li, Hairong Zheng, Shanshan Wang
However, the performance of these methods is limited due to the utilization of simple content-non-adaptive network parameters and the waste of the important 3D spatial information of the medical images.
1 code implementation • 9 Mar 2021 • Ziwen Ke, Zhuo-Xu Cui, Wenqi Huang, Jing Cheng, Sen Jia, Haifeng Wang, Xin Liu, Hairong Zheng, Leslie Ying, Yanjie Zhu, Dong Liang
The nonlinear manifold is designed to characterize the temporal correlation of dynamic signals.
no code implementations • 15 Dec 2020 • Shanshan Wang, Taohui Xiao, Qiegen Liu, Hairong Zheng
Magnetic resonance imaging is a powerful imaging modality that can provide versatile information but it has a bottleneck problem "slow imaging speed".
1 code implementation • 9 Dec 2020 • Shanshan Wang, Cheng Li, Rongpin Wang, Zaiyi Liu, Meiyun Wang, Hongna Tan, Yaping Wu, Xinfeng Liu, Hui Sun, Rui Yang, Xin Liu, Jie Chen, Huihui Zhou, Ismail Ben Ayed, Hairong Zheng
Automatic medical image segmentation plays a critical role in scientific research and medical care.
no code implementations • 27 Nov 2020 • Kehan Qi, Yu Gong, Xinfeng Liu, Xin Liu, Hairong Zheng, Shanshan Wang
Noises, artifacts, and loss of information caused by the magnetic resonance (MR) reconstruction may compromise the final performance of the downstream applications.
no code implementations • 5 Aug 2020 • Weijian Huang, Hao Yang, Xinfeng Liu, Cheng Li, Ian Zhang, Rongpin Wang, Hairong Zheng, Shan-Shan Wang
Multi-contrast magnetic resonance (MR) image registration is useful in the clinic to achieve fast and accurate imaging-based disease diagnosis and treatment planning.
no code implementations • 22 Jun 2020 • Ziwen Ke, Wenqi Huang, Jing Cheng, Zhuoxu Cui, Sen Jia, Haifeng Wang, Xin Liu, Hairong Zheng, Leslie Ying, Yanjie Zhu, Dong Liang
The deep learning methods have achieved attractive performance in dynamic MR cine imaging.
no code implementations • MIDL 2019 • Haoyun Liang, Yu Gong, Hoel Kervadec, Jing Yuan, Hairong Zheng, Shanshan Wang
A Laplacian pyramid-based complex neural network, CLP-Net, is proposed to reconstruct high-quality magnetic resonance images from undersampled k-space data.
1 code implementation • 20 Dec 2019 • Ziwen Ke, Jing Cheng, Leslie Ying, Hairong Zheng, Yanjie Zhu, Dong Liang
Although these deep learning methods can improve the reconstruction quality compared with iterative methods without requiring complex parameter selection or lengthy reconstruction time, the following issues still need to be addressed: 1) all these methods are based on big data and require a large amount of fully sampled MRI data, which is always difficult to obtain for cardiac MRI; 2) the effect of coil correlation on reconstruction in deep learning methods for dynamic MR imaging has never been studied.
no code implementations • 24 Aug 2019 • Shan-Shan Wang, Yanxia Chen, Taohui Xiao, Ziwen Ke, Qiegen Liu, Hairong Zheng
In comparison with state-of-the-art methods, extensive experiments show that our method achieves consistent better reconstruction performance on the MRI reconstruction in terms of three quantitative metrics (PSNR, SSIM and HFEN) under different undersamling patterns and acceleration factors.
no code implementations • 6 Aug 2019 • Cheng Li, Hui Sun, Zaiyi Liu, Meiyun Wang, Hairong Zheng, Shan-Shan Wang
From the different modalities, one modality that contributes most to the results is selected as the master modality, which supervises the information selection of the other assistant modalities.
2 code implementations • 16 Jul 2019 • Hao Yang, Weijian Huang, Kehan Qi, Cheng Li, Xinfeng Liu, Meiyun Wang, Hairong Zheng, Shan-Shan Wang
To address these challenges, this paper proposes a Cross-Level fusion and Context Inference Network (CLCI-Net) for the chronic stroke lesion segmentation from T1-weighted MR images.
no code implementations • 19 Jun 2019 • Jing Cheng, Haifeng Wang, Yanjie Zhu, Qiegen Liu, Qiyang Zhang, Ting Su, Jianwei Chen, Yongshuai Ge, Zhanli Hu, Xin Liu, Hairong Zheng, Leslie Ying, Dong Liang
Usually, acquiring less data is a direct but important strategy to address these issues.
1 code implementation • 11 Jun 2019 • Shan-Shan Wang, Huitao Cheng, Leslie Ying, Taohui Xiao, Ziwen Ke, Xin Liu, Hairong Zheng, Dong Liang
This paper proposes a multi-channel image reconstruction method, named DeepcomplexMRI, to accelerate parallel MR imaging with residual complex convolutional neural network.
no code implementations • 18 Jan 2019 • Ziwen Ke, Shan-Shan Wang, Huitao Cheng, Leslie Ying, Qiegen Liu, Hairong Zheng, Dong Liang
In this work, we propose cascaded residual dense networks for dynamic MR imaging with edge-enhance loss constraint, dubbed as CRDN.
no code implementations • 24 Oct 2018 • Hui Sun, Cheng Li, Boqiang Liu, Hairong Zheng, David Dagan Feng, Shan-Shan Wang
In AUNet, we employ an asymmetrical encoder-decoder structure and propose an effective upsampling block, attention-guided dense-upsampling block (AU block).
no code implementations • 30 Sep 2018 • Shan-Shan Wang, Ziwen Ke, Huitao Cheng, Sen Jia, Ying Leslie, Hairong Zheng, Dong Liang
Dynamic MR image reconstruction from incomplete k-space data has generated great research interest due to its capability in reducing scan time.
no code implementations • 21 Sep 2018 • Jingxu Xu, Cheng Li, Yongjin Zhou, Lisha Mou, Hairong Zheng, Shan-Shan Wang
Mammographic breast density, a parameter used to describe the proportion of breast tissue fibrosis, is widely adopted as an evaluation characteristic of the likelihood of breast cancer incidence.