$\textit{greylock}$: A Python Package for Measuring The Composition of Complex Datasets

1 code implementation • 29 Dec 2023 • Phuc Nguyen, Rohit Arora, Elliot D. Hill, Jasper Braun, Alexandra Morgan, Liza M. Quintana, Gabrielle Mazzoni, Ghee Rye Lee, Rima Arnaout, Ramy Arnaout

However, there exists a richer and potentially more useful set of measures, termed diversity measures, that incorporate elements' frequencies and between-element similarities.

Diversity

Scaling Monte-Carlo-Based Inference on Antibody and TCR Repertoires

no code implementations • 19 Dec 2023 • Josiah Couch, Rohit Arora, Jasper Braun, Joesph Kaplinsky, Elliot Hill, Anthony Li, Brett Altschul, Ramy Arnaout

We demonstrate that this new method enables the generation of accurate estimates for 27 models using only three expensive estimates, thereby reducing the computational cost by an order of magnitude.