no code implementations • 27 Feb 2022 • Marta Casanellas, Jesús Fernández-Sánchez, Marina Garrote-López, Marc Sabaté-Vidales
Second, we test and compare the performance of several quartet-based methods for phylogenetic tree reconstruction (namely, Quartet Puzzling, Weight Optimization and Wilson's method) in combination with ASAQ weights and other weights based on algebraic and semi-algebraic methods or on the paralinear distance.
no code implementations • 27 Oct 2023 • Marta Casanellas, Jesús Fernández-Sánchez
With the aim of enlarging the practical uses of algebraic phylogenetics, in this paper we prove that phylogenetic invariants for trees evolving under equivariant models can be derived from phylogenetic invariants for the general Markov model, without the need of representation theory.
