1 code implementation • ICML 2020 • Sai Krishna Gottipati, Boris Sattarov, Sufeng. Niu, Hao-Ran Wei, Yashaswi Pathak, Shengchao Liu, Simon Blackburn, Karam Thomas, Connor Coley, Jian Tang, Sarath Chandar, Yoshua Bengio
In this work, we propose a novel reinforcement learning (RL) setup for drug discovery that addresses this challenge by embedding the concept of synthetic accessibility directly into the de novo compound design system.
no code implementations • ICML 2020 • Meng Qu, Tianyu Gao, Louis-Pascal Xhonneux, Jian Tang
This paper studies few-shot relation extraction, which aims at predicting the relation for a pair of entities in a sentence by training with a few labeled examples in each relation.
no code implementations • NAACL (ALVR) 2021 • Zhifeng Li, Yu Hong, Yuchen Pan, Jian Tang, Jianmin Yao, Guodong Zhou
Besides of linguistic features in captions, MNMT allows visual(image) features to be used.
no code implementations • 19 Sep 2024 • Junjie Wen, Yichen Zhu, Jinming Li, Minjie Zhu, Kun Wu, Zhiyuan Xu, Ning Liu, Ran Cheng, Chaomin Shen, Yaxin Peng, Feifei Feng, Jian Tang
Vision-Language-Action (VLA) models have shown remarkable potential in visuomotor control and instruction comprehension through end-to-end learning processes.
no code implementations • 18 Sep 2024 • Junqi Liu, Shaoning Li, Chence Shi, Zhi Yang, Jian Tang
Designing novel proteins that bind to small molecules is a long-standing challenge in computational biology, with applications in developing catalysts, biosensors, and more.
no code implementations • 9 Sep 2024 • Sitao Luan, Qincheng Lu, Chenqing Hua, Xinyu Wang, Jiaqi Zhu, Xiao-Wen Chang, Guy Wolf, Jian Tang
To overcome these challenges, we first train and fine-tune baseline models on $27$ most widely used benchmark datasets, categorize them into three distinct groups: malignant, benign and ambiguous heterophilic datasets, and identify the real challenging subsets of tasks.
no code implementations • 22 Aug 2024 • Xinyu Yuan, Zhihao Zhan, Zuobai Zhang, Manqi Zhou, Jianan Zhao, Boyu Han, Yue Li, Jian Tang
The novel loss component guide scCello to learn the cell-type-specific representation and the structural relation between cell types from the cell ontology graph, respectively.
no code implementations • 11 Aug 2024 • Jiangxia Cao, Shen Wang, Yue Li, ShengHui Wang, Jian Tang, Shiyao Wang, Shuang Yang, Zhaojie Liu, Guorui Zhou
Kuaishou, is one of the largest short-video and live-streaming platform, compared with short-video recommendations, live-streaming recommendation is more complex because of: (1) temporarily-alive to distribution, (2) user may watch for a long time with feedback delay, (3) content is unpredictable and changes over time.
no code implementations • 12 Jul 2024 • Sitao Luan, Chenqing Hua, Qincheng Lu, Liheng Ma, Lirong Wu, Xinyu Wang, Minkai Xu, Xiao-Wen Chang, Doina Precup, Rex Ying, Stan Z. Li, Jian Tang, Guy Wolf, Stefanie Jegelka
In this survey, we provide a comprehensive review of the latest progress on heterophilic graph learning, including an extensive summary of benchmark datasets and evaluation of homophily metrics on synthetic graphs, meticulous classification of the most updated supervised and unsupervised learning methods, thorough digestion of the theoretical analysis on homophily/heterophily, and broad exploration of the heterophily-related applications.
no code implementations • 7 Jul 2024 • Liekang Zeng, Shengyuan Ye, Xu Chen, Xiaoxi Zhang, Ju Ren, Jian Tang, Yang Yang, Xuemin, Shen
Recent years have witnessed a thriving growth of computing facilities connected at the network edge, cultivating edge computing networks as a fundamental infrastructure for supporting miscellaneous intelligent services.
no code implementations • 28 Jun 2024 • Jinming Li, Yichen Zhu, Zhiyuan Xu, Jindong Gu, Minjie Zhu, Xin Liu, Ning Liu, Yaxin Peng, Feifei Feng, Jian Tang
It is fundamentally challenging for robots to serve as useful assistants in human environments because this requires addressing a spectrum of sub-problems across robotics, including perception, language understanding, reasoning, and planning.
1 code implementation • 19 Jun 2024 • Arian R. Jamasb, Alex Morehead, Chaitanya K. Joshi, Zuobai Zhang, Kieran Didi, Simon V. Mathis, Charles Harris, Jian Tang, Jianlin Cheng, Pietro Lio, Tom L. Blundell
We introduce ProteinWorkshop, a comprehensive benchmark suite for representation learning on protein structures with Geometric Graph Neural Networks.
1 code implementation • 30 May 2024 • Jianan Zhao, Hesham Mostafa, Mikhail Galkin, Michael Bronstein, Zhaocheng Zhu, Jian Tang
Traditional graph ML models such as graph neural networks (GNNs) trained on graphs cannot perform inference on a new graph with feature and label spaces different from the training ones.
1 code implementation • 25 May 2024 • Minghao Xu, Yunteng Geng, Yihang Zhang, Ling Yang, Jian Tang, Wentao Zhang
Also, we evaluate how taxonomy prediction can boost other three function prediction tasks by MTL.
no code implementations • 1 May 2024 • Shaoning Li, Yusong Wang, Mingyu Li, Jian Zhang, Bin Shao, Nanning Zheng, Jian Tang
Molecular dynamics (MD) is a crucial technique for simulating biological systems, enabling the exploration of their dynamic nature and fostering an understanding of their functions and properties.
1 code implementation • 10 Apr 2024 • Mikhail Galkin, Jincheng Zhou, Bruno Ribeiro, Jian Tang, Zhaocheng Zhu
Complex logical query answering (CLQA) in knowledge graphs (KGs) goes beyond simple KG completion and aims at answering compositional queries comprised of multiple projections and logical operations.
no code implementations • 13 Mar 2024 • Ang Li, Qiugen Xiao, Peng Cao, Jian Tang, Yi Yuan, Zijie Zhao, Xiaoyuan Chen, Liang Zhang, Xiangyang Li, Kaitong Yang, Weidong Guo, Yukang Gan, Xu Yu, Daniell Wang, Ying Shan
Using ChatGPT as a labeler to provide feedback on open-domain prompts in RLAIF training, we observe an increase in human evaluators' preference win ratio for model responses, but a decrease in evaluators' satisfaction rate.
no code implementations • 11 Mar 2024 • Leo Chen, Benjamin Boardley, Ping Hu, Yiru Wang, Yifan Pu, Xin Jin, Yongqiang Yao, Ruihao Gong, Bo Li, Gao Huang, Xianglong Liu, Zifu Wan, Xinwang Chen, Ning Liu, Ziyi Zhang, Dongping Liu, Ruijie Shan, Zhengping Che, Fachao Zhang, Xiaofeng Mou, Jian Tang, Maxim Chuprov, Ivan Malofeev, Alexander Goncharenko, Andrey Shcherbin, Arseny Yanchenko, Sergey Alyamkin, Xiao Hu, George K. Thiruvathukal, Yung Hsiang Lu
This article describes the 2023 IEEE Low-Power Computer Vision Challenge (LPCVC).
1 code implementation • 10 Mar 2024 • Minjie Zhu, Yichen Zhu, Xin Liu, Ning Liu, Zhiyuan Xu, Chaomin Shen, Yaxin Peng, Zhicai Ou, Feifei Feng, Jian Tang
Multimodal Large Language Models (MLLMs) have showcased impressive skills in tasks related to visual understanding and reasoning.
Ranked #122 on Visual Question Answering on MM-Vet
no code implementations • 16 Feb 2024 • Jiarui Lu, Zuobai Zhang, Bozitao Zhong, Chence Shi, Jian Tang
The protein dynamics are common and important for their biological functions and properties, the study of which usually involves time-consuming molecular dynamics (MD) simulations in silico.
no code implementations • 10 Feb 2024 • Zuobai Zhang, Jiarui Lu, Vijil Chenthamarakshan, Aurélie Lozano, Payel Das, Jian Tang
Protein function annotation is an important yet challenging task in biology.
no code implementations • 8 Feb 2024 • Sophie Xhonneux, David Dobre, Jian Tang, Gauthier Gidel, Dhanya Sridhar
Specifically, we investigate whether in-context learning (ICL) can be used to re-learn forbidden tasks despite the explicit fine-tuning of the model to refuse them.
1 code implementation • 7 Feb 2024 • Zuobai Zhang, Jiarui Lu, Vijil Chenthamarakshan, Aurélie Lozano, Payel Das, Jian Tang
To address this issue, we introduce the integration of remote homology detection to distill structural information into protein language models without requiring explicit protein structures as input.
no code implementations • 6 Feb 2024 • Xiangru Tang, Qiao Jin, Kunlun Zhu, Tongxin Yuan, Yichi Zhang, Wangchunshu Zhou, Meng Qu, Yilun Zhao, Jian Tang, Zhuosheng Zhang, Arman Cohan, Zhiyong Lu, Mark Gerstein
Intelligent agents powered by large language models (LLMs) have demonstrated substantial promise in autonomously conducting experiments and facilitating scientific discoveries across various disciplines.
no code implementations • 31 Jan 2024 • Dong Chen, Ning Liu, Yichen Zhu, Zhengping Che, Rui Ma, Fachao Zhang, Xiaofeng Mou, Yi Chang, Jian Tang
Instead of a simple combination of pruning and SD, EPSD enables the pruned network to favor SD by keeping more distillable weights before training to ensure better distillation of the pruned network.
1 code implementation • 29 Jan 2024 • Shengchao Liu, Chengpeng Wang, Jiarui Lu, Weili Nie, Hanchen Wang, Zhuoxinran Li, Bolei Zhou, Jian Tang
Deep generative models (DGMs) have been widely developed for graph data.
no code implementations • 17 Jan 2024 • Kun Wu, Ning Liu, Zhen Zhao, Di Qiu, Jinming Li, Zhengping Che, Zhiyuan Xu, Qinru Qiu, Jian Tang
Imitation learning (IL), aiming to learn optimal control policies from expert demonstrations, has been an effective method for robot manipulation tasks.
no code implementations • 17 Jan 2024 • Haowen Wang, Zhen Zhao, Zhao Jin, Zhengping Che, Liang Qiao, Yakun Huang, Zhipeng Fan, XIUQUAN QIAO, Jian Tang
Reconstructing real-world objects and estimating their movable joint structures are pivotal technologies within the field of robotics.
no code implementations • 17 Jan 2024 • Yinuo Zhao, Kun Wu, Tianjiao Yi, Zhiyuan Xu, Xiaozhu Ju, Zhengping Che, Qinru Qiu, Chi Harold Liu, Jian Tang
Visuomotor policies, which learn control mechanisms directly from high-dimensional visual observations, confront challenges in adapting to new environments with intricate visual variations.
no code implementations • 8 Jan 2024 • Minjie Zhu, Yichen Zhu, Jinming Li, Junjie Wen, Zhiyuan Xu, Zhengping Che, Chaomin Shen, Yaxin Peng, Dong Liu, Feifei Feng, Jian Tang
The language-conditioned robotic manipulation aims to transfer natural language instructions into executable actions, from simple pick-and-place to tasks requiring intent recognition and visual reasoning.
no code implementations • 5 Jan 2024 • Junjie Wen, Yichen Zhu, Minjie Zhu, Jinming Li, Zhiyuan Xu, Zhengping Che, Chaomin Shen, Yaxin Peng, Dong Liu, Feifei Feng, Jian Tang
Humans interpret scenes by recognizing both the identities and positions of objects in their observations.
1 code implementation • 4 Jan 2024 • Yichen Zhu, Minjie Zhu, Ning Liu, Zhicai Ou, Xiaofeng Mou, Jian Tang
In this paper, we introduce LLaVA-$\phi$ (LLaVA-Phi), an efficient multi-modal assistant that harnesses the power of the recently advanced small language model, Phi-2, to facilitate multi-modal dialogues.
Ranked #145 on Visual Question Answering on MM-Vet
no code implementations • 20 Dec 2023 • Chengxiang Yin, Zhengping Che, Kun Wu, Zhiyuan Xu, Jian Tang
Visual Question Answering (VQA) has emerged as one of the most challenging tasks in artificial intelligence due to its multi-modal nature.
no code implementations • 20 Dec 2023 • Chengxiang Yin, Zhengping Che, Kun Wu, Zhiyuan Xu, Qinru Qiu, Jian Tang
Video Question Answering (VideoQA) is a very attractive and challenging research direction aiming to understand complex semantics of heterogeneous data from two domains, i. e., the spatio-temporal video content and the word sequence in question.
no code implementations • 18 Dec 2023 • Wanying Wang, Yichen Zhu, Yirui Zhou, Chaomin Shen, Jian Tang, Zhiyuan Xu, Yaxin Peng, Yangchun Zhang
Generative Adversarial Imitation Learning (GAIL) stands as a cornerstone approach in imitation learning.
no code implementations • 4 Dec 2023 • Chao Shen, Wenkang Zhan, Jian Tang, Zhaofeng Wu, Bo Xu, Chao Zhao, Zhanguo Wang
It standardizes deoxidation temperatures across various equipment and substrate materials, advancing the standardization research process in semiconductor preparation, a significant milestone in thin film growth technology.
1 code implementation • 30 Nov 2023 • Chuanrui Wang, Bozitao Zhong, Zuobai Zhang, Narendra Chaudhary, Sanchit Misra, Jian Tang
Structure-based protein design has attracted increasing interest, with numerous methods being introduced in recent years.
no code implementations • 10 Oct 2023 • Zhaocheng Zhu, Yuan Xue, Xinyun Chen, Denny Zhou, Jian Tang, Dale Schuurmans, Hanjun Dai
In the deduction stage, the LLM is then prompted to employ the learned rule library to perform reasoning to answer test questions.
1 code implementation • 6 Oct 2023 • Dominique Beaini, Shenyang Huang, Joao Alex Cunha, Zhiyi Li, Gabriela Moisescu-Pareja, Oleksandr Dymov, Samuel Maddrell-Mander, Callum McLean, Frederik Wenkel, Luis Müller, Jama Hussein Mohamud, Ali Parviz, Michael Craig, Michał Koziarski, Jiarui Lu, Zhaocheng Zhu, Cristian Gabellini, Kerstin Klaser, Josef Dean, Cas Wognum, Maciej Sypetkowski, Guillaume Rabusseau, Reihaneh Rabbany, Jian Tang, Christopher Morris, Ioannis Koutis, Mirco Ravanelli, Guy Wolf, Prudencio Tossou, Hadrien Mary, Therence Bois, Andrew Fitzgibbon, Błażej Banaszewski, Chad Martin, Dominic Masters
Recently, pre-trained foundation models have enabled significant advancements in multiple fields.
1 code implementation • 6 Oct 2023 • Mikhail Galkin, Xinyu Yuan, Hesham Mostafa, Jian Tang, Zhaocheng Zhu
The key challenge of designing foundation models on KGs is to learn such transferable representations that enable inference on any graph with arbitrary entity and relation vocabularies.
1 code implementation • 2 Oct 2023 • Jianan Zhao, Le Zhuo, Yikang Shen, Meng Qu, Kai Liu, Michael Bronstein, Zhaocheng Zhu, Jian Tang
Furthermore, GraphText paves the way for interactive graph reasoning, allowing both humans and LLMs to communicate with the model seamlessly using natural language.
no code implementations • 4 Aug 2023 • Haowen Wang, Zhipeng Fan, Zhen Zhao, Zhengping Che, Zhiyuan Xu, Dong Liu, Feifei Feng, Yakun Huang, XIUQUAN QIAO, Jian Tang
We introduce a pose regression module that shares the deformation features and template codes from the fields to estimate the accurate 6D pose of each object in the scene.
no code implementations • 22 Jun 2023 • Chao Shen, Wenkang Zhan, Kaiyao Xin, Manyang Li, Zhenyu Sun, Hui Cong, Chi Xu, Jian Tang, Zhaofeng Wu, Bo Xu, Zhongming Wei, Chunlai Xue, Chao Zhao, Zhanguo Wang
Self-assembled InAs/GaAs quantum dots (QDs) have properties highly valuable for developing various optoelectronic devices such as QD lasers and single photon sources.
no code implementations • 22 Jun 2023 • Andreea Deac, Jian Tang
Graph neural networks (GNNs) have demonstrated success in modeling relational data, especially for data that exhibits homophily: when a connection between nodes tends to imply that they belong to the same class.
1 code implementation • NeurIPS 2023 • Shengchao Liu, Weitao Du, Yanjing Li, Zhuoxinran Li, Zhiling Zheng, Chenru Duan, ZhiMing Ma, Omar Yaghi, Anima Anandkumar, Christian Borgs, Jennifer Chayes, Hongyu Guo, Jian Tang
Artificial intelligence for scientific discovery has recently generated significant interest within the machine learning and scientific communities, particularly in the domains of chemistry, biology, and material discovery.
no code implementations • 6 Jun 2023 • Haowen Wang, Zhengping Che, Yufan Yang, Mingyuan Wang, Zhiyuan Xu, XIUQUAN QIAO, Mengshi Qi, Feifei Feng, Jian Tang
Raw depth images captured in indoor scenarios frequently exhibit extensive missing values due to the inherent limitations of the sensors and environments.
1 code implementation • 5 Jun 2023 • Jiarui Lu, Bozitao Zhong, Zuobai Zhang, Jian Tang
The dynamic nature of proteins is crucial for determining their biological functions and properties, for which Monte Carlo (MC) and molecular dynamics (MD) simulations stand as predominant tools to study such phenomena.
1 code implementation • NeurIPS 2023 • Yangtian Zhang, Zuobai Zhang, Bozitao Zhong, Sanchit Misra, Jian Tang
In this work, we present DiffPack, a torsional diffusion model that learns the joint distribution of side-chain torsional angles, the only degrees of freedom in side-chain packing, by diffusing and denoising on the torsional space.
1 code implementation • 28 May 2023 • Shengchao Liu, Weitao Du, ZhiMing Ma, Hongyu Guo, Jian Tang
Meanwhile, existing molecule multi-modal pretraining approaches approximate MI based on the representation space encoded from the topology and geometry, thus resulting in the loss of critical structural information of molecules.
no code implementations • 23 Mar 2023 • Mingze Wei, Yaomin Huang, Zhiyuan Xu, Ning Liu, Zhengping Che, Xinyu Zhang, Chaomin Shen, Feifei Feng, Chun Shan, Jian Tang
Our work significantly outperforms the state-of-the-art for three-finger robotic hands.
no code implementations • 23 Mar 2023 • Yaomin Huang, Ning Liu, Zhengping Che, Zhiyuan Xu, Chaomin Shen, Yaxin Peng, Guixu Zhang, Xinmei Liu, Feifei Feng, Jian Tang
CP$^3$ is elaborately designed to leverage the characteristics of point clouds and PNNs in order to enable 2D channel pruning methods for PNNs.
3 code implementations • 11 Mar 2023 • Zuobai Zhang, Chuanrui Wang, Minghao Xu, Vijil Chenthamarakshan, Aurélie Lozano, Payel Das, Jian Tang
Recent sequence representation learning methods based on Protein Language Models (PLMs) excel in sequence-based tasks, but their direct adaptation to tasks involving protein structures remains a challenge.
1 code implementation • 23 Feb 2023 • Fang Sun, Zhihao Zhan, Hongyu Guo, Ming Zhang, Jian Tang
In particular, GraphVF represents the first controllable geometry-aware, protein-specific molecule generation method, which can generate binding 3D molecules with tailored sub-structures and physio-chemical properties.
3 code implementations • 9 Feb 2023 • Shengchao Liu, Yanjing Li, Zhuoxinran Li, Anthony Gitter, Yutao Zhu, Jiarui Lu, Zhao Xu, Weili Nie, Arvind Ramanathan, Chaowei Xiao, Jian Tang, Hongyu Guo, Anima Anandkumar
Current AI-assisted protein design mainly utilizes protein sequential and structural information.
1 code implementation • 28 Jan 2023 • Minghao Xu, Xinyu Yuan, Santiago Miret, Jian Tang
On downstream tasks, ProtST enables both supervised learning and zero-shot prediction.
1 code implementation • NeurIPS 2023 • Zuobai Zhang, Minghao Xu, Aurélie Lozano, Vijil Chenthamarakshan, Payel Das, Jian Tang
Considering the essential protein conformational variations, we enhance DiffPreT by a method called Siamese Diffusion Trajectory Prediction (SiamDiff) to capture the correlation between different conformers of a protein.
1 code implementation • 5 Jan 2023 • Yan Li, Xinjiang Lu, Haoyi Xiong, Jian Tang, Jiantao Su, Bo Jin, Dejing Dou
Long-term time-series forecasting (LTTF) has become a pressing demand in many applications, such as wind power supply planning.
no code implementations • CVPR 2023 • Yaomin Huang, Ning Liu, Zhengping Che, Zhiyuan Xu, Chaomin Shen, Yaxin Peng, Guixu Zhang, Xinmei Liu, Feifei Feng, Jian Tang
Directly implementing the 2D CNN channel pruning methods to PNNs undermine the performance of PNNs because of the different representations of 2D images and 3D point clouds as well as the network architecture disparity.
no code implementations • CVPR 2023 • Yichen Zhu, Qiqi Zhou, Ning Liu, Zhiyuan Xu, Zhicai Ou, Xiaofeng Mou, Jian Tang
Unlike existing works that struggle to balance the trade-off between inference speed and SOD performance, in this paper, we propose a novel Scale-aware Knowledge Distillation (ScaleKD), which transfers knowledge of a complex teacher model to a compact student model.
1 code implementation • 21 Dec 2022 • Shengchao Liu, Weili Nie, Chengpeng Wang, Jiarui Lu, Zhuoran Qiao, Ling Liu, Jian Tang, Chaowei Xiao, Anima Anandkumar
Here we present a multi-modal molecule structure-text model, MoleculeSTM, by jointly learning molecules' chemical structures and textual descriptions via a contrastive learning strategy.
1 code implementation • NeurIPS 2023 • Ryan-Rhys Griffiths, Leo Klarner, Henry B. Moss, Aditya Ravuri, Sang Truong, Samuel Stanton, Gary Tom, Bojana Rankovic, Yuanqi Du, Arian Jamasb, Aryan Deshwal, Julius Schwartz, Austin Tripp, Gregory Kell, Simon Frieder, Anthony Bourached, Alex Chan, Jacob Moss, Chengzhi Guo, Johannes Durholt, Saudamini Chaurasia, Felix Strieth-Kalthoff, Alpha A. Lee, Bingqing Cheng, Alán Aspuru-Guzik, Philippe Schwaller, Jian Tang
By defining such kernels in GAUCHE, we seek to open the door to powerful tools for uncertainty quantification and Bayesian optimisation in chemistry.
1 code implementation • 23 Nov 2022 • Minghao Xu, Yuanfan Guo, Yi Xu, Jian Tang, Xinlei Chen, Yuandong Tian
We study EurNets in two important domains for image and protein structure modeling.
no code implementations • 9 Nov 2022 • Shengchao Liu, David Vazquez, Jian Tang, Pierre-André Noël
We explore the downstream task performances for graph neural network (GNN) self-supervised learning (SSL) methods trained on subgraphs extracted from relational databases (RDBs).
2 code implementations • 26 Oct 2022 • Jianan Zhao, Meng Qu, Chaozhuo Li, Hao Yan, Qian Liu, Rui Li, Xing Xie, Jian Tang
In this paper, we propose an efficient and effective solution to learning on large text-attributed graphs by fusing graph structure and language learning with a variational Expectation-Maximization (EM) framework, called GLEM.
Ranked #1 on Node Property Prediction on ogbn-papers100M
no code implementations • 17 Oct 2022 • Chence Shi, Chuanrui Wang, Jiarui Lu, Bozitao Zhong, Jian Tang
Proteins are macromolecules that perform essential functions in all living organisms.
1 code implementation • 13 Oct 2022 • Mikhail Galkin, Zhaocheng Zhu, Hongyu Ren, Jian Tang
Exploring the efficiency--effectiveness trade-off, we find the inductive relational structure representation method generally achieves higher performance, while the inductive node representation method is able to answer complex queries in the inference-only regime without any training on queries and scales to graphs of millions of nodes.
no code implementations • 12 Oct 2022 • Yangtian Zhang, Huiyu Cai, Chence Shi, Bozitao Zhong, Jian Tang
In silico prediction of the ligand binding pose to a given protein target is a crucial but challenging task in drug discovery.
1 code implementation • 30 Sep 2022 • Songtao Liu, Zhengkai Tu, Minkai Xu, Zuobai Zhang, Lu Lin, Rex Ying, Jian Tang, Peilin Zhao, Dinghao Wu
Current strategies use a decoupled approach of single-step retrosynthesis models and search algorithms, taking only the product as the input to predict the reactants for each planning step and ignoring valuable context information along the synthetic route.
1 code implementation • 28 Sep 2022 • Shaohua Fan, Xiao Wang, Yanhu Mo, Chuan Shi, Jian Tang
However, by presenting a graph classification investigation on the training graphs with severe bias, surprisingly, we discover that GNNs always tend to explore the spurious correlations to make decision, even if the causal correlation always exists.
1 code implementation • 24 Jul 2022 • Yaomin Huang, Xinmei Liu, Yichen Zhu, Zhiyuan Xu, Chaomin Shen, Zhengping Che, Guixu Zhang, Yaxin Peng, Feifei Feng, Jian Tang
Detecting 3D objects from point clouds is a practical yet challenging task that has attracted increasing attention recently.
no code implementations • 10 Jul 2022 • Kun Wu, Chengxiang Yin, Jian Tang, Zhiyuan Xu, Yanzhi Wang, Dejun Yang
In this paper, we define a new problem called continual few-shot learning, in which tasks arrive sequentially and each task is associated with a few training samples.
2 code implementations • 27 Jun 2022 • Shengchao Liu, Hongyu Guo, Jian Tang
Further by leveraging an SE(3)-invariant score matching method, we propose GeoSSL-DDM in which the coordinate denoising proxy task is effectively boiled down to denoising the pairwise atomic distances in a molecule.
1 code implementation • NeurIPS 2023 • Hanchen Wang, Jean Kaddour, Shengchao Liu, Jian Tang, Joan Lasenby, Qi Liu
Graph Self-Supervised Learning (GSSL) provides a robust pathway for acquiring embeddings without expert labelling, a capability that carries profound implications for molecular graphs due to the staggering number of potential molecules and the high cost of obtaining labels.
2 code implementations • NeurIPS 2023 • Zhaocheng Zhu, Xinyu Yuan, Mikhail Galkin, Sophie Xhonneux, Ming Zhang, Maxime Gazeau, Jian Tang
Experiments on both transductive and inductive knowledge graph reasoning benchmarks show that A*Net achieves competitive performance with existing state-of-the-art path-based methods, while merely visiting 10% nodes and 10% edges at each iteration.
Ranked #10 on Link Property Prediction on ogbl-wikikg2
1 code implementation • 5 Jun 2022 • Minghao Xu, Zuobai Zhang, Jiarui Lu, Zhaocheng Zhu, Yangtian Zhang, Chang Ma, Runcheng Liu, Jian Tang
However, there is a lack of a standard benchmark to evaluate the performance of different methods, which hinders the progress of deep learning in this field.
1 code implementation • 1 Jun 2022 • Dingmin Wang, Shengchao Liu, Hanchen Wang, Bernardo Cuenca Grau, Linfeng Song, Jian Tang, Song Le, Qi Liu
Graph Neural Networks (GNNs) are effective tools for graph representation learning.
1 code implementation • 26 May 2022 • Minghao Xu, Yuanfan Guo, Xuanyu Zhu, Jiawen Li, Zhenbang Sun, Jian Tang, Yi Xu, Bingbing Ni
This framework aims to learn multiple semantic representations for each image, and these representations are structured to encode image semantics from fine-grained to coarse-grained.
no code implementations • 24 May 2022 • Chenqing Hua, Guillaume Rabusseau, Jian Tang
Graph Neural Networks (GNNs) are attracting growing attention due to their effectiveness and flexibility in modeling a variety of graph-structured data.
no code implementations • 23 May 2022 • Kuangqi Zhou, Kaixin Wang, Jiashi Feng, Jian Tang, Tingyang Xu, Xinchao Wang
However, existing best deep AL methods are mostly developed for a single type of learning task (e. g., single-label classification), and hence may not perform well in molecular property prediction that involves various task types.
1 code implementation • ICML 2022 • Zhaocheng Zhu, Mikhail Galkin, Zuobai Zhang, Jian Tang
Answering complex first-order logic (FOL) queries on knowledge graphs is a fundamental task for multi-hop reasoning.
Ranked #3 on Complex Query Answering on FB15k-237
1 code implementation • ICLR 2022 • Meng Qu, Huiyu Cai, Jian Tang
This problem has been extensively studied with graph neural networks (GNNs) by learning effective node representations, as well as traditional structured prediction methods for modeling the structured output of node labels, e. g., conditional random fields (CRFs).
1 code implementation • 30 Mar 2022 • Sean Bin Yang, Chenjuan Guo, Jilin Hu, Bin Yang, Jian Tang, Christian S. Jensen
In this setting, it is essential to learn generic temporal path representations(TPRs) that consider spatial and temporal correlations simultaneously and that can be used in different applications, i. e., downstream tasks.
no code implementations • 26 Mar 2022 • Sha Yuan, Hanyu Zhao, Shuai Zhao, Jiahong Leng, Yangxiao Liang, Xiaozhi Wang, Jifan Yu, Xin Lv, Zhou Shao, Jiaao He, Yankai Lin, Xu Han, Zhenghao Liu, Ning Ding, Yongming Rao, Yizhao Gao, Liang Zhang, Ming Ding, Cong Fang, Yisen Wang, Mingsheng Long, Jing Zhang, Yinpeng Dong, Tianyu Pang, Peng Cui, Lingxiao Huang, Zheng Liang, HuaWei Shen, HUI ZHANG, Quanshi Zhang, Qingxiu Dong, Zhixing Tan, Mingxuan Wang, Shuo Wang, Long Zhou, Haoran Li, Junwei Bao, Yingwei Pan, Weinan Zhang, Zhou Yu, Rui Yan, Chence Shi, Minghao Xu, Zuobai Zhang, Guoqiang Wang, Xiang Pan, Mengjie Li, Xiaoyu Chu, Zijun Yao, Fangwei Zhu, Shulin Cao, Weicheng Xue, Zixuan Ma, Zhengyan Zhang, Shengding Hu, Yujia Qin, Chaojun Xiao, Zheni Zeng, Ganqu Cui, Weize Chen, Weilin Zhao, Yuan YAO, Peng Li, Wenzhao Zheng, Wenliang Zhao, Ziyi Wang, Borui Zhang, Nanyi Fei, Anwen Hu, Zenan Ling, Haoyang Li, Boxi Cao, Xianpei Han, Weidong Zhan, Baobao Chang, Hao Sun, Jiawen Deng, Chujie Zheng, Juanzi Li, Lei Hou, Xigang Cao, Jidong Zhai, Zhiyuan Liu, Maosong Sun, Jiwen Lu, Zhiwu Lu, Qin Jin, Ruihua Song, Ji-Rong Wen, Zhouchen Lin, LiWei Wang, Hang Su, Jun Zhu, Zhifang Sui, Jiajun Zhang, Yang Liu, Xiaodong He, Minlie Huang, Jian Tang, Jie Tang
With the rapid development of deep learning, training Big Models (BMs) for multiple downstream tasks becomes a popular paradigm.
no code implementations • CVPR 2022 • Haowen Wang, Mingyuan Wang, Zhengping Che, Zhiyuan Xu, XIUQUAN QIAO, Mengshi Qi, Feifei Feng, Jian Tang
In this paper, we design a novel two-branch end-to-end fusion network, which takes a pair of RGB and incomplete depth images as input to predict a dense and completed depth map.
2 code implementations • 11 Mar 2022 • Zuobai Zhang, Minghao Xu, Arian Jamasb, Vijil Chenthamarakshan, Aurelie Lozano, Payel Das, Jian Tang
Despite the effectiveness of sequence-based approaches, the power of pretraining on known protein structures, which are available in smaller numbers only, has not been explored for protein property prediction, though protein structures are known to be determinants of protein function.
2 code implementations • ICLR 2022 • Minkai Xu, Lantao Yu, Yang song, Chence Shi, Stefano Ermon, Jian Tang
GeoDiff treats each atom as a particle and learns to directly reverse the diffusion process (i. e., transforming from a noise distribution to stable conformations) as a Markov chain.
1 code implementation • ACL 2022 • Jing Zhang, Xiaokang Zhang, Jifan Yu, Jian Tang, Jie Tang, Cuiping Li, Hong Chen
Recent works on knowledge base question answering (KBQA) retrieve subgraphs for easier reasoning.
1 code implementation • 22 Feb 2022 • Shengchao Liu, Meng Qu, Zuobai Zhang, Huiyu Cai, Jian Tang
However, in contrast to other domains, the performance of multi-task learning in drug discovery is still not satisfying as the number of labeled data for each task is too limited, which calls for additional data to complement the data scarcity.
1 code implementation • 17 Feb 2022 • Yinuo Zhao, Kun Wu, Zhiyuan Xu, Zhengping Che, Qi Lu, Jian Tang, Chi Harold Liu
Vision-based autonomous urban driving in dense traffic is quite challenging due to the complicated urban environment and the dynamics of the driving behaviors.
1 code implementation • 16 Feb 2022 • Zhaocheng Zhu, Chence Shi, Zuobai Zhang, Shengchao Liu, Minghao Xu, Xinyu Yuan, Yangtian Zhang, Junkun Chen, Huiyu Cai, Jiarui Lu, Chang Ma, Runcheng Liu, Louis-Pascal Xhonneux, Meng Qu, Jian Tang
However, lacking domain knowledge (e. g., which tasks to work on), standard benchmarks and data preprocessing pipelines are the main obstacles for machine learning researchers to work in this domain.
1 code implementation • 28 Jan 2022 • Wujie Wang, Minkai Xu, Chen Cai, Benjamin Kurt Miller, Tess Smidt, Yusu Wang, Jian Tang, Rafael Gómez-Bombarelli
Coarse-graining (CG) of molecular simulations simplifies the particle representation by grouping selected atoms into pseudo-beads and drastically accelerates simulation.
no code implementations • 18 Dec 2021 • Rui Han, Qinglong Zhang, Chi Harold Liu, Guoren Wang, Jian Tang, Lydia Y. Chen
The prior art sheds light on exploring the accuracy-resource tradeoff by scaling the model sizes in accordance to resource dynamics.
1 code implementation • 13 Dec 2021 • Stephen Bonner, Ufuk Kirik, Ola Engkvist, Jian Tang, Ian P Barrett
We provide support for this observation across different datasets, models as well as predictive tasks.
no code implementations • 3 Dec 2021 • Yichen Zhu, Yuqin Zhu, Jie Du, Yi Wang, Zhicai Ou, Feifei Feng, Jian Tang
The TLA enables the ReViT to process the image with the minimum sufficient number of tokens during inference.
no code implementations • NeurIPS 2021 • Minghao Xu, Meng Qu, Bingbing Ni, Jian Tang
We further propose an efficient and effective algorithm for inference based on mean-field variational inference, in which we first provide a warm initialization by independently predicting the objects and their relations according to the current model, followed by a few iterations of relational reasoning.
no code implementations • 1 Dec 2021 • Yichen Zhu, Jie Du, Yuqin Zhu, Yi Wang, Zhicai Ou, Feifei Feng, Jian Tang
Critically, there is no effort to understand 1) why training BatchNorm only can find the perform-well architectures with the reduced supernet-training time, and 2) what is the difference between the train-BN-only supernet and the standard-train supernet.
no code implementations • NeurIPS 2021 • Shitong Luo, Chence Shi, Minkai Xu, Jian Tang
However, these non-bonded atoms may be proximal to each other in 3D space, and modeling their interactions is of crucial importance to accurately determine molecular conformations, especially for large molecules and multi-molecular complexes.
no code implementations • NeurIPS 2021 • Louis-Pascal A. C. Xhonneux, Andreea Deac, Petar Velickovic, Jian Tang
Due to the fundamental differences between algorithmic reasoning knowledge and feature extractors such as used in Computer Vision or NLP, we hypothesise that standard transfer techniques will not be sufficient to achieve systematic generalisation.
no code implementations • 21 Oct 2021 • Wenzheng Hu, Zhengping Che, Ning Liu, Mingyang Li, Jian Tang, ChangShui Zhang, Jianqiang Wang
Deep convolutional neural networks are shown to be overkill with high parametric and computational redundancy in many application scenarios, and an increasing number of works have explored model pruning to obtain lightweight and efficient networks.
no code implementations • NeurIPS 2021 • Andreea Deac, Petar Veličković, Ognjen Milinković, Pierre-Luc Bacon, Jian Tang, Mladen Nikolić
We find that prior approaches either assume that the environment is provided in such a tabular form -- which is highly restrictive -- or infer "local neighbourhoods" of states to run value iteration over -- for which we discover an algorithmic bottleneck effect.
1 code implementation • ICLR 2022 • Shengchao Liu, Hanchen Wang, Weiyang Liu, Joan Lasenby, Hongyu Guo, Jian Tang
However, the lack of 3D information in real-world scenarios has significantly impeded the learning of geometric graph representation.
no code implementations • NeurIPS Workshop AI4Scien 2021 • Shengchao Liu, Meng Qu, Zuobai Zhang, Huiyu Cai, Jian Tang
In this paper, we study multi-task learning for molecule property prediction in a different setting, where a relation graph between different tasks is available.
no code implementations • 23 Jul 2021 • Kun Wu, Chengxiang Yin, Zhengping Che, Bo Jiang, Jian Tang, Zheng Guan, Gangyi Ding
Deep generative models have made great progress in synthesizing images with arbitrary human poses and transferring poses of one person to others.
1 code implementation • 17 Jun 2021 • Sean Bin Yang, Chenjuan Guo, Jilin Hu, Jian Tang, Bin Yang
In the global view, PIM distinguishes the representations of the input paths from those of the negative paths.
1 code implementation • NeurIPS 2021 • Zhaocheng Zhu, Zuobai Zhang, Louis-Pascal Xhonneux, Jian Tang
To further improve the capacity of the path formulation, we propose the Neural Bellman-Ford Network (NBFNet), a general graph neural network framework that solves the path formulation with learned operators in the generalized Bellman-Ford algorithm.
Ranked #1 on Link Prediction on FB15k-237
no code implementations • 8 Jun 2021 • Hangrui Bi, Hengyi Wang, Chence Shi, Connor Coley, Jian Tang, Hongyu Guo
Reliably predicting the products of chemical reactions presents a fundamental challenge in synthetic chemistry.
1 code implementation • 8 Jun 2021 • Minghao Xu, Hang Wang, Bingbing Ni, Hongyu Guo, Jian Tang
This paper studies unsupervised/self-supervised whole-graph representation learning, which is critical in many tasks such as molecule properties prediction in drug and material discovery.
1 code implementation • 15 May 2021 • Minkai Xu, Wujie Wang, Shitong Luo, Chence Shi, Yoshua Bengio, Rafael Gomez-Bombarelli, Jian Tang
Specifically, the molecular graph is first encoded in a latent space, and then the 3D structures are generated by solving a principled bilevel optimization program.
6 code implementations • 9 May 2021 • Chence Shi, Shitong Luo, Minkai Xu, Jian Tang
We study a fundamental problem in computational chemistry known as molecular conformation generation, trying to predict stable 3D structures from 2D molecular graphs.
3 code implementations • ICLR 2021 • Minkai Xu, Shitong Luo, Yoshua Bengio, Jian Peng, Jian Tang
Inspired by the recent progress in deep generative models, in this paper, we propose a novel probabilistic framework to generate valid and diverse conformations given a molecular graph.
no code implementations • 19 Feb 2021 • Ning Liu, Geng Yuan, Zhengping Che, Xuan Shen, Xiaolong Ma, Qing Jin, Jian Ren, Jian Tang, Sijia Liu, Yanzhi Wang
In deep model compression, the recent finding "Lottery Ticket Hypothesis" (LTH) (Frankle & Carbin, 2018) pointed out that there could exist a winning ticket (i. e., a properly pruned sub-network together with original weight initialization) that can achieve competitive performance than the original dense network.
no code implementations • ICCV 2021 • Chengxiang Yin, Kun Wu, Zhengping Che, Bo Jiang, Zhiyuan Xu, Jian Tang
Deep learning has made tremendous success in computer vision, natural language processing and even visual-semantic learning, which requires a huge amount of labeled training data.
no code implementations • 1 Jan 2021 • Minghao Xu, Hang Wang, Bingbing Ni, Wenjun Zhang, Jian Tang
We propose to disentangle graph structure and node attributes into two distinct sets of representations, and such disentanglement can be done in either the input or the embedding space.
no code implementations • 1 Jan 2021 • Yewen Wang, Jian Tang, Yizhou Sun, Guy Wolf
We empirically analyse our proposed DGL-GNN model, and demonstrate its effectiveness and superior efficiency through a range of experiments.
no code implementations • 16 Dec 2020 • Hangrui Bi, Hengyi Wang, Chence Shi, Jian Tang
Our model achieves both an order of magnitude lower inference latency, with state-of-the-art top-1 accuracy and comparable performance on Top-K sampling.
no code implementations • 9 Dec 2020 • Thomas Gaudelet, Ben Day, Arian R. Jamasb, Jyothish Soman, Cristian Regep, Gertrude Liu, Jeremy B. R. Hayter, Richard Vickers, Charles Roberts, Jian Tang, David Roblin, Tom L. Blundell, Michael M. Bronstein, Jake P. Taylor-King
Graph Machine Learning (GML) is receiving growing interest within the pharmaceutical and biotechnology industries for its ability to model biomolecular structures, the functional relationships between them, and integrate multi-omic datasets - amongst other data types.
1 code implementation • 7 Dec 2020 • Minkai Xu, Zhiming Zhou, Guansong Lu, Jian Tang, Weinan Zhang, Yong Yu
Wasserstein GANs (WGANs), built upon the Kantorovich-Rubinstein (KR) duality of Wasserstein distance, is one of the most theoretically sound GAN models.
no code implementations • 5 Nov 2020 • Xuanzhao Wang, Zhengping Che, Bo Jiang, Ning Xiao, Ke Yang, Jian Tang, Jieping Ye, Jingyu Wang, Qi Qi
In this paper, we propose a novel and robust unsupervised video anomaly detection method by frame prediction with proper design which is more in line with the characteristics of surveillance videos.
no code implementations • 5 Nov 2020 • Yue Shi, Bo Jiang, Zhengping Che, Jian Tang
In this work, we present a novel module, the Fluff block, to alleviate drawbacks of current multi-scale fusion methods and facilitate multi-scale object detection.
no code implementations • 4 Nov 2020 • Yushuo Guan, Ning Liu, Pengyu Zhao, Zhengping Che, Kaigui Bian, Yanzhi Wang, Jian Tang
The convolutional neural network has achieved great success in fulfilling computer vision tasks despite large computation overhead against efficient deployment.
no code implementations • 30 Oct 2020 • Prateek Gupta, Tegan Maharaj, Martin Weiss, Nasim Rahaman, Hannah Alsdurf, Abhinav Sharma, Nanor Minoyan, Soren Harnois-Leblanc, Victor Schmidt, Pierre-Luc St. Charles, Tristan Deleu, Andrew Williams, Akshay Patel, Meng Qu, Olexa Bilaniuk, Gaétan Marceau Caron, Pierre Luc Carrier, Satya Ortiz-Gagné, Marc-Andre Rousseau, David Buckeridge, Joumana Ghosn, Yang Zhang, Bernhard Schölkopf, Jian Tang, Irina Rish, Christopher Pal, Joanna Merckx, Eilif B. Muller, Yoshua Bengio
The rapid global spread of COVID-19 has led to an unprecedented demand for effective methods to mitigate the spread of the disease, and various digital contact tracing (DCT) methods have emerged as a component of the solution.
no code implementations • 26 Oct 2020 • Luanxuan Hou, Jie Cao, Yuan Zhao, Haifeng Shen, Jian Tang, Ran He
We propose a refinement stage for the pyramid features to further boost the accuracy of our network.
no code implementations • 25 Oct 2020 • Andreea Deac, Petar Veličković, Ognjen Milinković, Pierre-Luc Bacon, Jian Tang, Mladen Nikolić
Value Iteration Networks (VINs) have emerged as a popular method to incorporate planning algorithms within deep reinforcement learning, enabling performance improvements on tasks requiring long-range reasoning and understanding of environment dynamics.
1 code implementation • NeurIPS 2020 • Wangchunshu Zhou, Jinyi Hu, HANLIN ZHANG, Xiaodan Liang, Maosong Sun, Chenyan Xiong, Jian Tang
In this paper, we develop a general framework for interpretable natural language understanding that requires only a small set of human annotated explanations for training.
1 code implementation • ICLR 2021 • Yoshua Bengio, Prateek Gupta, Tegan Maharaj, Nasim Rahaman, Martin Weiss, Tristan Deleu, Eilif Muller, Meng Qu, Victor Schmidt, Pierre-Luc St-Charles, Hannah Alsdurf, Olexa Bilanuik, David Buckeridge, Gáetan Marceau Caron, Pierre-Luc Carrier, Joumana Ghosn, Satya Ortiz-Gagne, Chris Pal, Irina Rish, Bernhard Schölkopf, Abhinav Sharma, Jian Tang, Andrew Williams
Predictions are used to provide personalized recommendations to the individual via an app, as well as to send anonymized messages to the individual's contacts, who use this information to better predict their own infectiousness, an approach we call proactive contact tracing (PCT).
no code implementations • 23 Oct 2020 • HANLIN ZHANG, Shuai Lin, Weiyang Liu, Pan Zhou, Jian Tang, Xiaodan Liang, Eric P. Xing
Recently, there has been increasing interest in the challenge of how to discriminatively vectorize graphs.
1 code implementation • NeurIPS 2020 • Zhiyuan Xu, Kun Wu, Zhengping Che, Jian Tang, Jieping Ye
While Deep Reinforcement Learning (DRL) has emerged as a promising approach to many complex tasks, it remains challenging to train a single DRL agent that is capable of undertaking multiple different continuous control tasks.
2 code implementations • ICLR 2021 • Meng Qu, Junkun Chen, Louis-Pascal Xhonneux, Yoshua Bengio, Jian Tang
Then in the E-step, we select a set of high-quality rules from all generated rules with both the rule generator and reasoning predictor via posterior inference; and in the M-step, the rule generator is updated with the rules selected in the E-step.
no code implementations • 8 Oct 2020 • Cheng Shen, Jianghua Ying, Le Liu, Jianpeng Liu, Na Li, Shuopei Wang, Jian Tang, Yanchong Zhao, Yanbang Chu, Kenji Watanabe, Takashi Taniguchi, Rong Yang, Dongxia Shi, Fanming Qu, Li Lu, Wei Yang, Guangyu Zhang
For {\theta}=1. 25{\deg}, we observe an emergence of topological insulating states at hole side with a sequence of Chern number |C|=4-|v|, where v is the number of electrons (holes) in moir\'e unite cell.
Mesoscale and Nanoscale Physics Materials Science
no code implementations • 26 Sep 2020 • Andreea Deac, Pierre-Luc Bacon, Jian Tang
Previously, such planning components have been incorporated through a neural network that partially aligns with the computational graph of value iteration.
no code implementations • ECCV 2020 • Yushuo Guan, Pengyu Zhao, Bingxuan Wang, Yuanxing Zhang, Cong Yao, Kaigui Bian, Jian Tang
To tackle with both the efficiency and the effectiveness of knowledge distillation, we introduce the feature aggregation to imitate the multi-teacher distillation in the single-teacher distillation framework by extracting informative supervision from multiple teacher feature maps.
no code implementations • 16 Jul 2020 • Simeon Spasov, Alessandro Di Stefano, Pietro Lio, Jian Tang
At each time step link generation is performed by first assigning node membership from a distribution over the communities, and then sampling a neighbor from a distribution over the nodes for the assigned community.
1 code implementation • 5 Jul 2020 • Meng Qu, Tianyu Gao, Louis-Pascal A. C. Xhonneux, Jian Tang
To more effectively generalize to new relations, in this paper we study the relationships between different relations and propose to leverage a global relation graph.
no code implementations • 26 Jun 2020 • Ivan Bacher, Hossein Javidnia, Soumyabrata Dev, Rahul Agrahari, Murhaf Hossari, Matthew Nicholson, Clare Conran, Jian Tang, Peng Song, David Corrigan, François Pitié
Over the past decade, the evolution of video-sharing platforms has attracted a significant amount of investments on contextual advertising.
1 code implementation • NeurIPS 2020 • Shengding Hu, Zheng Xiong, Meng Qu, Xingdi Yuan, Marc-Alexandre Côté, Zhiyuan Liu, Jian Tang
Graph neural networks (GNNs) have been attracting increasing popularity due to their simplicity and effectiveness in a variety of fields.
no code implementations • 18 May 2020 • Hannah Alsdurf, Edmond Belliveau, Yoshua Bengio, Tristan Deleu, Prateek Gupta, Daphne Ippolito, Richard Janda, Max Jarvie, Tyler Kolody, Sekoul Krastev, Tegan Maharaj, Robert Obryk, Dan Pilat, Valerie Pisano, Benjamin Prud'homme, Meng Qu, Nasim Rahaman, Irina Rish, Jean-Francois Rousseau, Abhinav Sharma, Brooke Struck, Jian Tang, Martin Weiss, Yun William Yu
Manual contact tracing of Covid-19 cases has significant challenges that limit the ability of public health authorities to minimize community infections.
1 code implementation • 14 May 2020 • Shuang Li, Chi Harold Liu, Qiuxia Lin, Binhui Xie, Zhengming Ding, Gao Huang, Jian Tang
Most existing deep DA models only focus on aligning feature representations of task-specific layers across domains while integrating a totally shared convolutional architecture for source and target.
no code implementations • 1 May 2020 • Mark Marsden, Kevin McGuinness, Joseph Antony, Haolin Wei, Milan Redzic, Jian Tang, Zhilan Hu, Alan Smeaton, Noel E. O'Connor
This work investigates the use of class-level difficulty factors in multi-label classification problems for the first time.
1 code implementation • 26 Apr 2020 • Sai Krishna Gottipati, Boris Sattarov, Sufeng. Niu, Yashaswi Pathak, Hao-Ran Wei, Shengchao Liu, Karam M. J. Thomas, Simon Blackburn, Connor W. Coley, Jian Tang, Sarath Chandar, Yoshua Bengio
Over the last decade, there has been significant progress in the field of machine learning for de novo drug design, particularly in deep generative models.
no code implementations • ICML 2020 • Chence Shi, Minkai Xu, Hongyu Guo, Ming Zhang, Jian Tang
A fundamental problem in computational chemistry is to find a set of reactants to synthesize a target molecule, a. k. a.
Ranked #29 on Single-step retrosynthesis on USPTO-50k
1 code implementation • NeurIPS 2020 • Ashutosh Adhikari, Xingdi Yuan, Marc-Alexandre Côté, Mikuláš Zelinka, Marc-Antoine Rondeau, Romain Laroche, Pascal Poupart, Jian Tang, Adam Trischler, William L. Hamilton
Playing text-based games requires skills in processing natural language and sequential decision making.
1 code implementation • ICLR 2020 • Chence Shi, Minkai Xu, Zhaocheng Zhu, Wei-Nan Zhang, Ming Zhang, Jian Tang
Molecular graph generation is a fundamental problem for drug discovery and has been attracting growing attention.
Ranked #1 on Molecular Graph Generation on MOSES