1 code implementation • 1 Mar 2025 • Tianyi Wang, Jianan Fan, Dingxin Zhang, Dongnan Liu, Yong Xia, Heng Huang, Weidong Cai
MIRROR employs dedicated encoders to extract comprehensive features for each modality, which is further complemented by a modality alignment module to achieve seamless integration between phenotype patterns and molecular profiles.
1 code implementation • 17 Feb 2025 • Hao Xu, Tengfei Xue, Jianan Fan, Dongnan Liu, Yuqian Chen, Fan Zhang, Carl-Fredrik Westin, Ron Kikinis, Lauren J. O'Donnell, Weidong Cai
The framework includes: (1) Explicit anatomical information injection, where SAM-generated segmentation masks are used as auxiliary inputs throughout training and testing to ensure the consistency of anatomical information; (2) Prototype learning, which leverages segmentation masks to extract prototype features and aligns prototypes to optimize semantic correspondences between images; and (3) Contour-aware loss, a contour-aware loss is designed that leverages the edges of segmentation masks to improve the model's performance in fine-grained deformation fields.
no code implementations • 22 Nov 2024 • Yaxuan Song, Jianan Fan, Heng Huang, Mei Chen, Weidong Cai
To solve these challenges, CAP introduces two key innovations: (1) adaptive event-guided (AEG) sampling, which prioritizes cell division events to mitigate the occurrence imbalance of cell events, and (2) the rolling-as-window (RAW) inference strategy, which ensures continuous and stable tracking of newly emerging cells over extended sequences.
1 code implementation • 6 Nov 2024 • Mingyu Sheng, Jianan Fan, Dongnan Liu, Ron Kikinis, Weidong Cai
Recent unsupervised surgical instrument segmentation (USIS) methods primarily rely on pseudo-labels derived from low-level features such as color and optical flow, but these methods show limited effectiveness and generalizability in complex and unseen endoscopic scenarios.
1 code implementation • 27 Aug 2024 • Mingyu Sheng, Jianan Fan, Dongnan Liu, Ron Kikinis, Weidong Cai
In this work, we propose an unsupervised method by reframing the video frame segmentation as a graph partitioning problem and regarding image pixels as graph nodes, which is significantly different from the previous efforts.
1 code implementation • 14 Jul 2024 • Jianan Fan, Dongnan Liu, Canran Li, Hang Chang, Heng Huang, Filip Braet, Mei Chen, Weidong Cai
Cellular nuclei recognition serves as a fundamental and essential step in the workflow of digital pathology.
no code implementations • CVPR 2024 • Jianan Fan, Dongnan Liu, Hang Chang, Heng Huang, Mei Chen, Weidong Cai
Machine learning holds tremendous promise for transforming the fundamental practice of scientific discovery by virtue of its data-driven nature.
1 code implementation • 9 Feb 2024 • Yaxuan Song, Jianan Fan, Dongnan Liu, Weidong Cai
Source-free domain adaptation (SFDA) alleviates the domain discrepancy among data obtained from domains without accessing the data for the awareness of data privacy.
no code implementations • 17 Jan 2024 • Jianan Fan, Dongnan Liu, Hang Chang, Weidong Cai
Annotation scarcity and cross-modality/stain data distribution shifts are two major obstacles hindering the application of deep learning models for nuclei analysis, which holds a broad spectrum of potential applications in digital pathology.
2 code implementations • 14 Dec 2023 • Wenhai Wang, Jiangwei Xie, Chuanyang Hu, Haoming Zou, Jianan Fan, Wenwen Tong, Yang Wen, Silei Wu, Hanming Deng, Zhiqi Li, Hao Tian, Lewei Lu, Xizhou Zhu, Xiaogang Wang, Yu Qiao, Jifeng Dai
In this work, we delve into the potential of large language models (LLMs) in autonomous driving (AD).
1 code implementation • ICCV 2023 • Jianan Fan, Dongnan Liu, Hang Chang, Heng Huang, Mei Chen, Weidong Cai
The success of automated medical image analysis depends on large-scale and expert-annotated training sets.