Search Results for author: Jiawen Yao

Found 17 papers, 3 papers with code

$M^{2}$Fusion: Bayesian-based Multimodal Multi-level Fusion on Colorectal Cancer Microsatellite Instability Prediction

no code implementations15 Jan 2024 Quan Liu, Jiawen Yao, Lisha Yao, Xin Chen, Jingren Zhou, Le Lu, Ling Zhang, Zaiyi Liu, Yuankai Huo

The contribution of the paper is three-fold: (1) $M^{2}$Fusion is the first pipeline of multi-level fusion on pathology WSI and 3D radiology CT image for MSI prediction; (2) CT images are the first time integrated into multimodal fusion for CRC MSI prediction; (3) feature-level fusion strategy is evaluated on both Transformer-based and CNN-based method.

Representation Learning Weakly-supervised Learning +1

Improved Prognostic Prediction of Pancreatic Cancer Using Multi-Phase CT by Integrating Neural Distance and Texture-Aware Transformer

no code implementations1 Aug 2023 Hexin Dong, Jiawen Yao, Yuxing Tang, Mingze Yuan, Yingda Xia, Jian Zhou, Hong Lu, Jingren Zhou, Bin Dong, Le Lu, Li Zhang, Zaiyi Liu, Yu Shi, Ling Zhang

Pancreatic ductal adenocarcinoma (PDAC) is a highly lethal cancer in which the tumor-vascular involvement greatly affects the resectability and, thus, overall survival of patients.

Cluster-Induced Mask Transformers for Effective Opportunistic Gastric Cancer Screening on Non-contrast CT Scans

no code implementations10 Jul 2023 Mingze Yuan, Yingda Xia, Xin Chen, Jiawen Yao, Junli Wang, Mingyan Qiu, Hexin Dong, Jingren Zhou, Bin Dong, Le Lu, Li Zhang, Zaiyi Liu, Ling Zhang

In our experiments, the proposed method achieves a sensitivity of 85. 0% and specificity of 92. 6% for detecting gastric tumors on a hold-out test set consisting of 100 patients with cancer and 148 normal.

Specificity Test

Meta-information-aware Dual-path Transformer for Differential Diagnosis of Multi-type Pancreatic Lesions in Multi-phase CT

no code implementations2 Mar 2023 Bo Zhou, Yingda Xia, Jiawen Yao, Le Lu, Jingren Zhou, Chi Liu, James S. Duncan, Ling Zhang

Accurate detection, segmentation, and differential diagnosis of the full taxonomy of pancreatic lesions, i. e., normal, seven major types of lesions, and other lesions, is critical to aid the clinical decision-making of patient management and treatment.

Classification Decision Making +2

A deep local attention network for pre-operative lymph node metastasis prediction in pancreatic cancer via multiphase CT imaging

no code implementations4 Jan 2023 Zhilin Zheng, Xu Fang, Jiawen Yao, Mengmeng Zhu, Le Lu, Lingyun Huang, Jing Xiao, Yu Shi, Hong Lu, Jianping Lu, Ling Zhang, Chengwei Shao, Yun Bian

Lymph node (LN) metastasis status is one of the most critical prognostic and cancer staging factors for patients with resectable pancreatic ductal adenocarcinoma (PDAC), or in general, for any types of solid malignant tumors.

Segmentation

Whole Slide Images based Cancer Survival Prediction using Attention Guided Deep Multiple Instance Learning Networks

1 code implementation23 Sep 2020 Jiawen Yao, Xinliang Zhu, Jitendra Jonnagaddala, Nicholas Hawkins, Junzhou Huang

We evaluated our methods on two large cancer whole slide images datasets and our results suggest that the proposed approach is more effective and suitable for large datasets and has better interpretability in locating important patterns and features that contribute to accurate cancer survival predictions.

Deep Attention Multiple Instance Learning +2

DeepPrognosis: Preoperative Prediction of Pancreatic Cancer Survival and Surgical Margin via Contrast-Enhanced CT Imaging

no code implementations26 Aug 2020 Jiawen Yao, Yu Shi, Le Lu, Jing Xiao, Ling Zhang

We present a multi-task CNN to accomplish both tasks of outcome and margin prediction where the network benefits from learning the tumor resection margin related features to improve survival prediction.

Survival Analysis Survival Prediction

CT Data Curation for Liver Patients: Phase Recognition in Dynamic Contrast-Enhanced CT

no code implementations5 Sep 2019 Bo Zhou, Adam P. Harrison, Jiawen Yao, Chi-Tung Cheng, Jing Xiao, Chien-Hung Liao, Le Lu

This is the focus of our work, where we present a principled data curation tool to extract multi-phase CT liver studies and identify each scan's phase from a real-world and heterogenous hospital PACS dataset.

Descriptive

Robust Contextual Bandit via the Capped-$\ell_{2}$ norm

no code implementations17 Aug 2017 Feiyun Zhu, Xinliang Zhu, Sheng Wang, Jiawen Yao, Junzhou Huang

In the critic updating, the capped-$\ell_{2}$ norm is used to measure the approximation error, which prevents outliers from dominating our objective.

Decision Making

WSISA: Making Survival Prediction From Whole Slide Histopathological Images

no code implementations CVPR 2017 Xinliang Zhu, Jiawen Yao, Feiyun Zhu, Junzhou Huang

Different from existing state-of-the-arts image-based survival models which extract features using some patches from small regions of WSIs, the proposed framework can efficiently exploit and utilize all discriminative patterns in WSIs to predict patients' survival status.

Survival Analysis Survival Prediction

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