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Found 11 papers, 5 papers with code
SHAPE: A Sample-adaptive Hierarchical Prediction Network for Medication Recommendation
Effectively medication recommendation with complex multimorbidity conditions is a critical task in healthcare.
A systematic evaluation of large language models for biomedical natural language processing: benchmarks, baselines, and recommendations
The biomedical literature is rapidly expanding, posing a significant challenge for manual curation and knowledge discovery.
Improving Large Language Models for Clinical Named Entity Recognition via Prompt Engineering
Results: Using baseline prompts, GPT-3. 5 and GPT-4 achieved relaxed F1 scores of 0. 634, 0. 804 for MTSamples, and 0. 301, 0. 593 for VAERS.
Multi-label classification for biomedical literature: an overview of the BioCreative VII LitCovid Track for COVID-19 literature topic annotations
To close the gap, we organized the BioCreative LitCovid track to call for a community effort to tackle automated topic annotation for COVID-19 literature.
LitMC-BERT: transformer-based multi-label classification of biomedical literature with an application on COVID-19 literature curation
However, it has been a primary curation bottleneck due to the nature of the task and the rapid literature growth.
Mining On Alzheimer's Diseases Related Knowledge Graph to Identity Potential AD-related Semantic Triples for Drug Repurposing
The 1, 672, 110 filtered triples were used to train with knowledge graph completion algorithms (i. e., TransE, DistMult, and ComplEx) to predict candidates that might be helpful for AD treatment or prevention.
Knowledge Graph-based Neurodegenerative Diseases and Diet Relationship Discovery
To date, there are no effective treatments for most neurodegenerative diseases.
Deep Representation Learning of Patient Data from Electronic Health Records (EHR): A Systematic Review
We show the importance and feasibility of learning comprehensive representations of patient EHR data through a systematic review.
Deep learning with sentence embeddings pre-trained on biomedical corpora improves the performance of finding similar sentences in electronic medical records
For the post challenge, the performance of both Random Forest and the Encoder Network was improved; in particular, the correlation of the Encoder Network was improved by ~13%.
Exploring difference in public perceptions on HPV vaccine between gender groups from Twitter using deep learning
In this study, we proposed a convolutional neural network model for gender prediction using English Twitter text as input.
ML-Net: multi-label classification of biomedical texts with deep neural networks
Due to this nature, the multi-label text classification task is often considered to be more challenging compared to the binary or multi-class text classification problems.
