1 code implementation • 11 Sep 2023 • Can Firtina, Melina Soysal, Joël Lindegger, Onur Mutlu
Summary: Raw nanopore signals can be analyzed while they are being generated, a process known as real-time analysis.
1 code implementation • 9 Dec 2022 • Meryem Banu Cavlak, Gagandeep Singh, Mohammed Alser, Can Firtina, Joël Lindegger, Mohammad Sadrosadati, Nika Mansouri Ghiasi, Can Alkan, Onur Mutlu
However, for many applications, the majority of reads do no match the reference genome of interest (i. e., target reference) and thus are discarded in later steps in the genomics pipeline, wasting the basecalling computation.
1 code implementation • 8 Oct 2023 • Joël Lindegger, Can Firtina, Nika Mansouri Ghiasi, Mohammad Sadrosadati, Mohammed Alser, Onur Mutlu
mean) while improving accuracy by 1. 35$\times$ (1. 34$\times$) in terms of F-1 score on average (geo.
