no code implementations • 11 Nov 2022 • huan zhang, Robert J. Webber, Michael Lindsey, Timothy C. Berkelbach, Jonathan Weare
The use of neural network parametrizations to represent the ground state in variational Monte Carlo (VMC) calculations has generated intense interest in recent years.
no code implementations • 15 Feb 2021 • Justin Finkel, Robert J. Webber, Dorian S. Abbot, Edwin P. Gerber, Jonathan Weare
We compute the probability and lead time efficiently by solving equations involving the transition operator, which encodes all information about the dynamics.
Atmospheric and Oceanic Physics Dynamical Systems Data Analysis, Statistics and Probability
1 code implementation • 25 Jun 2020 • Zachary M. Boyd, Nicolas Fraiman, Jeremy L. Marzuola, Peter J. Mucha, Braxton Osting, Jonathan Weare
The shortest-path, commute time, and diffusion distances on undirected graphs have been widely employed in applications such as dimensionality reduction, link prediction, and trip planning.
1 code implementation • 13 Dec 2017 • Charles Matthews, Jonathan Weare, Andrey Kravtsov, Elise Jennings
We present the umbrella sampling (US) technique and show that it can be used to sample extremely low probability areas of the posterior distribution that may be required in statistical analyses of data.
Instrumentation and Methods for Astrophysics
1 code implementation • 13 Jul 2016 • Charles Matthews, Jonathan Weare, Benedict Leimkuhler
We describe parallel Markov chain Monte Carlo methods that propagate a collective ensemble of paths, with local covariance information calculated from neighboring replicas.