1 code implementation • 15 Aug 2024 • Haofeng Liu, Erli Zhang, Junde Wu, Mingxuan Hong, Yueming Jin
These advancements establish SurgSAM-2 as a leading model for surgical video analysis, making real-time surgical video segmentation in resource-constrained environments a feasible reality.
1 code implementation • 8 Aug 2024 • Junde Wu, Jiayuan Zhu, Yunli Qi
Our approach is validated through a comprehensive ablation study comparing various methods for document chunking, graph construction, and information retrieval.
no code implementations • 3 Aug 2024 • Jiayuan Zhu, Junde Wu
The uncertainty-aware model proposes several plausible segmentations to address the uncertainties inherent in medical images, while the human-in-the-loop interaction iteratively modifies the segmentation under clinician supervision.
1 code implementation • 1 Aug 2024 • Jiayuan Zhu, Yunli Qi, Junde Wu
By adopting the philosophy of taking medical images as videos, MedSAM-2 not only applies to 3D medical images but also unlocks new One-prompt Segmentation capability.
no code implementations • 2 Jun 2024 • Jiaying Zhou, Mingzhou Jiang, Junde Wu, Jiayuan Zhu, Ziyue Wang, Yueming Jin
We pre-trained on the TCGA dataset using paired gene expression data and imaging data, and fine-tuned it for downstream tumor segmentation tasks.
no code implementations • 16 Mar 2024 • Mingzhou Jiang, Jiaying Zhou, Junde Wu, Tianyang Wang, Yueming Jin, Min Xu
The Segment Anything Model (SAM) gained significant success in natural image segmentation, and many methods have tried to fine-tune it to medical image segmentation.
no code implementations • 8 Mar 2024 • Junde Wu, Jiayuan Zhu, Min Xu, Yueming Jin
Some visual recognition tasks are more challenging then the general ones as they require professional categories of images.
2 code implementations • CVPR 2024 • Junde Wu, Jiayuan Zhu, Yueming Jin, Min Xu
Tested on 14 previously unseen datasets, the One-Prompt Model showcases superior zero-shot segmentation capabilities, outperforming a wide range of related methods.
1 code implementation • 13 May 2023 • Huihui Fang, Fei Li, Junde Wu, Huazhu Fu, Xu sun, José Ignacio Orlando, Hrvoje Bogunović, Xiulan Zhang, Yanwu Xu
Our databases comprises 1200 images with associated labels for the pathologic myopia category and manual annotations of the optic disc, the position of the fovea and delineations of lesions such as patchy retinal atrophy (including peripapillary atrophy) and retinal detachment.
4 code implementations • 25 Apr 2023 • Junde Wu, Wei Ji, Yuanpei Liu, Huazhu Fu, Min Xu, Yanwu Xu, Yueming Jin
In Med-SA, we propose Space-Depth Transpose (SD-Trans) to adapt 2D SAM to 3D medical images and Hyper-Prompting Adapter (HyP-Adpt) to achieve prompt-conditioned adaptation.
Ranked #2 on Medical Image Segmentation on Synapse multi-organ CT
1 code implementation • 6 Apr 2023 • Yu Zhang, Xiaoguang Di, Junde Wu, Rao Fu, Yong Li, Yue Wang, Yanwu Xu, Guohui YANG, Chunhui Wang
In this paper, to make the learning easier in low-light image enhancement, we introduce FLW-Net (Fast and LightWeight Network) and two relative loss functions.
2 code implementations • 19 Jan 2023 • Junde Wu, Wei Ji, Huazhu Fu, Min Xu, Yueming Jin, Yanwu Xu
To effectively integrate these two cutting-edge techniques for the Medical image segmentation, we propose a novel Transformer-based Diffusion framework, called MedSegDiff-V2.
Ranked #3 on Medical Image Segmentation on Synapse multi-organ CT
no code implementations • 1 Dec 2022 • Junde Wu, Huihui Fang, Yehui Yang, Yuanpei Liu, Jing Gao, Lixin Duan, Weihua Yang, Yanwu Xu
In this paper, we propose a novel neural network framework, called Multi-Rater Prism (MrPrism) to learn the medical image segmentation from multiple labels.
no code implementations • 29 Nov 2022 • Junde Wu, Huihui Fang, Yehui Yang, Yu Zhang, Haoyi Xiong, Huazhu Fu, Yanwu Xu
In the paper, we call them expert-level classification.
2 code implementations • 1 Nov 2022 • Junde Wu, Rao Fu, Huihui Fang, Yu Zhang, Yehui Yang, Haoyi Xiong, Huiying Liu, Yanwu Xu
Inspired by the success of DPM, we propose the first DPM based model toward general medical image segmentation tasks, which we named MedSegDiff.
no code implementations • 23 Sep 2022 • Junde Wu, Huihui Fang, Fei Li, Huazhu Fu, Yanwu Xu
GAMMA Challenge is organized to encourage the AI models to screen the glaucoma from a combination of 2D fundus image and 3D optical coherence tomography volume, like the ophthalmologists.
1 code implementation • 5 Aug 2022 • Junde Wu, Yu Zhang, Rao Fu, Yuanpei Liu, Jing Gao
Then, to ensure that the method adapts to the dynamic and unseen person flow, we propose Graph Convolutional Network (GCN) with a simple Nearest Neighbor (NN) strategy to accurately cluster the instances of CSG.
2 code implementations • 5 Aug 2022 • Junde Wu, Huihui Fang, Hoayi Xiong, Lixin Duan, Mingkui Tan, Weihua Yang, Huiying Liu, Yanwu Xu
Inspired by this observation, we propose diagnosis-first principle, which is to take disease diagnosis as the criterion to calibrate the inter-observer segmentation uncertainty.
no code implementations • 29 Jul 2022 • Huihui Fang, Fei Li, Huazhu Fu, Junde Wu, Xiulan Zhang, Yanwu Xu
Glaucoma causes irreversible vision loss due to damage to the optic nerve, and there is no cure for glaucoma. OCT imaging modality is an essential technique for assessing glaucomatous damage since it aids in quantifying fundus structures.
no code implementations • 12 Jun 2022 • Junde Wu, Huihui Fang, Fangxin Shang, Dalu Yang, Zhaowei Wang, Jing Gao, Yehui Yang, Yanwu Xu
To model the segmentation-diagnosis interaction, SeA-block first embeds the diagnosis feature based on the segmentation information via the encoder, and then transfers the embedding back to the diagnosis feature space by a decoder.
1 code implementation • 10 Jun 2022 • Junde Wu, Huihui Fang, Fangxin Shang, Zhaowei Wang, Dalu Yang, Wenshuo Zhou, Yehui Yang, Yanwu Xu
In this paper, we propose a novel neural network framework to learn OD/OC segmentation from multi-rater annotations.
no code implementations • 8 Jun 2022 • Fangxin Shang, Yehui Yang, Dalu Yang, Junde Wu, Xiaorong Wang, Yanwu Xu
Pre-training is essential to deep learning model performance, especially in medical image analysis tasks where limited training data are available.
no code implementations • 31 May 2022 • Wenshuo Zhou, Dalu Yang, Binghong Wu, Yehui Yang, Junde Wu, Xiaorong Wang, Lei Wang, Haifeng Huang, Yanwu Xu
Deep learning based medical imaging classification models usually suffer from the domain shift problem, where the classification performance drops when training data and real-world data differ in imaging equipment manufacturer, image acquisition protocol, patient populations, etc.
no code implementations • 18 Feb 2022 • Huihui Fang, Fei Li, Junde Wu, Huazhu Fu, Xu sun, Jaemin Son, Shuang Yu, Menglu Zhang, Chenglang Yuan, Cheng Bian, Baiying Lei, Benjian Zhao, Xinxing Xu, Shaohua Li, Francisco Fumero, José Sigut, Haidar Almubarak, Yakoub Bazi, Yuanhao Guo, Yating Zhou, Ujjwal Baid, Shubham Innani, Tianjiao Guo, Jie Yang, José Ignacio Orlando, Hrvoje Bogunović, Xiulan Zhang, Yanwu Xu
Here we release a multi-annotation, multi-quality, and multi-device color fundus image dataset for glaucoma analysis on an original challenge -- Retinal Fundus Glaucoma Challenge 2nd Edition (REFUGE2).
1 code implementation • 14 Feb 2022 • Junde Wu, Huihui Fang, Dalu Yang, Zhaowei Wang, Wenshuo Zhou, Fangxin Shang, Yehui Yang, Yanwu Xu
Motivated by the observation that OD/OC segmentation is often used for the glaucoma diagnosis clinically, in this paper, we propose a novel strategy to fuse the multi-rater OD/OC segmentation labels via the glaucoma diagnosis performance.
no code implementations • 14 Feb 2022 • Junde Wu, Huihui Fang, Fei Li, Huazhu Fu, Fengbin Lin, Jiongcheng Li, Lexing Huang, Qinji Yu, Sifan Song, Xinxing Xu, Yanyu Xu, Wensai Wang, Lingxiao Wang, Shuai Lu, Huiqi Li, Shihua Huang, Zhichao Lu, Chubin Ou, Xifei Wei, Bingyuan Liu, Riadh Kobbi, Xiaoying Tang, Li Lin, Qiang Zhou, Qiang Hu, Hrvoje Bogunovic, José Ignacio Orlando, Xiulan Zhang, Yanwu Xu
However, although numerous algorithms are proposed based on fundus images or OCT volumes in computer-aided diagnosis, there are still few methods leveraging both of the modalities for the glaucoma assessment.
1 code implementation • 15 Sep 2021 • Binghong Wu, Yehui Yang, Dalu Yang, Junde Wu, Xiaorong Wang, Haifeng Huang, Lei Wang, Yanwu Xu
Based on focal loss with ATSS-R50, our approach achieves 40. 5 AP, surpassing the state-of-the-art QFL (Quality Focal Loss, 39. 9 AP) and VFL (Varifocal Loss, 40. 1 AP).
1 code implementation • CVPR 2021 • Wei Ji, Shuang Yu, Junde Wu, Kai Ma, Cheng Bian, Qi Bi, Jingjing Li, Hanruo Liu, Li Cheng, Yefeng Zheng
To our knowledge, our work is the first in producing calibrated predictions under different expertise levels for medical image segmentation.
no code implementations • 29 Jul 2020 • Wenting Chen, Shuang Yu, Junde Wu, Kai Ma, Cheng Bian, Chunyan Chu, Linlin Shen, Yefeng Zheng
A topology ranking discriminator based on ordinal regression is proposed to rank the topological connectivity level of the ground-truth, the generated A/V mask and the intentionally shuffled mask.
1 code implementation • 22 Jul 2020 • Junde Wu, Shuang Yu, WenTing Chen, Kai Ma, Rao Fu, Hanruo Liu, Xiaoguang Di, Yefeng Zheng
Recently, deep learning has been adopted to the glaucoma classification task with performance comparable to that of human experts.
1 code implementation • 29 Aug 2019 • Junde Wu, Rao Fu
The question is: Is there existan attack that can meet all these requirements?
no code implementations • 7 Mar 2019 • Junde Wu, Xiaoguang Di, Jiehao Huang, Yu Zhang
Recently, end-to-end learning-based methods based on deep neural network (DNN) have been proven effective for blind deblurring.