Spatial mapping of protein composition and tissue organization: a primer for multiplexed antibody-based imaging

no code implementations • 16 Jul 2021 • John W. Hickey, Elizabeth K. Neumann, Andrea J. Radtke, Jeannie M. Camarillo, Rebecca T. Beuschel, Alexandre Albanese, Elizabeth McDonough, Julia Hatler, Anne E. Wiblin, Jeremy Fisher, Josh Croteau, Eliza C. Small, Anup Sood, Richard M. Caprioli, R. Michael Angelo, Garry P. Nolan, Kwanghun Chung, Stephen M. Hewitt, Ronald N. Germain, Jeffrey M. Spraggins, Emma Lundberg, Michael P. Snyder, Neil L. Kelleher, Sinem K. Saka

Tissues and organs are composed of distinct cell types that must operate in concert to perform physiological functions.

Self-Supervised Feature Extraction for 3D Axon Segmentation

1 code implementation • 20 Apr 2020 • Tzofi Klinghoffer, Peter Morales, Young-Gyun Park, Nicholas Evans, Kwanghun Chung, Laura J. Brattain

Existing learning-based methods to automatically trace axons in 3D brain imagery often rely on manually annotated segmentation labels.

Segmentation