no code implementations • 29 Aug 2024 • Shuaishuai Guo, Jianheng Guo, Kaifan Ji, Hui Liu, Lei Xing
We also extracted features of planetary migration states and utilized lightGBM to classify the samples into 6 categories for prediction.
1 code implementation • 6 Aug 2024 • Yunfei Xie, Ce Zhou, Lang Gao, Juncheng Wu, Xianhang Li, Hong-Yu Zhou, Sheng Liu, Lei Xing, James Zou, Cihang Xie, Yuyin Zhou
We then build a comprehensive knowledge base and prompt multimodal large language models to perform retrieval-augmented generation with the identified ROIs as guidance, resulting in multigranular texual descriptions.
Ranked #1 on Medical Visual Question Answering on SLAKE-English (using extra training data)
Medical Visual Question Answering Visual Question Answering (VQA)
no code implementations • 10 Jul 2024 • Praveenbalaji Rajendran, Yong Yang, Thomas R. Niedermayr, Michael Gensheimer, Beth Beadle, Quynh-Thu Le, Lei Xing, Xianjin Dai
Radiation therapy (RT) is one of the most effective treatments for cancer, and its success relies on the accurate delineation of targets.
no code implementations • 21 Jun 2024 • Sheng Liu, Oscar Pastor-Serrano, Yizheng Chen, Matthew Gopaulchan, Weixing Liang, Mark Buyyounouski, Erqi Pollom, Quynh-Thu Le, Michael Gensheimer, Peng Dong, Yong Yang, James Zou, Lei Xing
Consistently satisfying the dosimetric objectives in the clinical protocol, GPT-RadPlan represents the first multimodal large language model agent that mimics the behaviors of human planners in radiation oncology clinics, achieving remarkable results in automating the treatment planning process without the need for additional training.
no code implementations • 23 Apr 2024 • Qian Xu, Kai Chen, Xueqi Shen, Lei Xing, Yi Huang, Tian Hong Loh
By counting the number of pass/fail occurrences of a DUT (Device under Test) in the stirring process in a reverberation chamber (RC), the threshold electric field (E-field) level can be well estimated without tuning the input power and repeating the whole testing many times.
1 code implementation • 11 Nov 2023 • Sheng Liu, Haotian Ye, Lei Xing, James Zou
On a new query, instead of adding demonstrations to the prompt, we shift the latent states of the LLM using the ICV.
3 code implementations • 11 Oct 2023 • Jieneng Chen, Jieru Mei, Xianhang Li, Yongyi Lu, Qihang Yu, Qingyue Wei, Xiangde Luo, Yutong Xie, Ehsan Adeli, Yan Wang, Matthew Lungren, Lei Xing, Le Lu, Alan Yuille, Yuyin Zhou
In this paper, we extend the 2D TransUNet architecture to a 3D network by building upon the state-of-the-art nnU-Net architecture, and fully exploring Transformers' potential in both the encoder and decoder design.
1 code implementation • 23 Aug 2023 • Pierre-Louis Benveniste, Julie Alberge, Lei Xing, Jean-Emmanuel Bibault
In this study, we propose a machine learning (ML) tool trained on data from the PLCO Cancer Screening Trial and validated on the NLST to estimate the likelihood of lung cancer occurrence within five years.
1 code implementation • 21 Jul 2023 • Qingyue Wei, Lequan Yu, Xianhang Li, Wei Shao, Cihang Xie, Lei Xing, Yuyin Zhou
Specifically, our approach first involves training a segmentation model on a small set of clean labeled images to generate initial labels for unlabeled data.
1 code implementation • 26 Apr 2023 • Bingqian Lin, Zicong Chen, Mingjie Li, Haokun Lin, Hang Xu, Yi Zhu, Jianzhuang Liu, Wenjia Cai, Lei Yang, Shen Zhao, Chenfei Wu, Ling Chen, Xiaojun Chang, Yi Yang, Lei Xing, Xiaodan Liang
In MOTOR, we combine two kinds of basic medical knowledge, i. e., general and specific knowledge, in a complementary manner to boost the general pretraining process.
no code implementations • 6 Jun 2022 • Charles Huang, Varun Vasudevan, Oscar Pastor-Serrano, Md Tauhidul Islam, Yusuke Nomura, Piotr Dubrowski, Jen-Yeu Wang, Joseph B. Schulz, Yong Yang, Lei Xing
To address these limitations, we propose a content based image retrieval (CBIR) method for retrieving dose distributions of previously planned patients based on anatomical similarity.
1 code implementation • 17 May 2022 • Rui Yan, Liangqiong Qu, Qingyue Wei, Shih-Cheng Huang, Liyue Shen, Daniel Rubin, Lei Xing, Yuyin Zhou
The collection and curation of large-scale medical datasets from multiple institutions is essential for training accurate deep learning models, but privacy concerns often hinder data sharing.
no code implementations • 15 Mar 2022 • Rui Xu, Lei Xing, Shuai Shao, Lifei Zhao, BaoDi Liu, Weifeng Liu, Yicong Zhou
First, we propose a novel label prediction method, Isolated Graph Learning (IGL).
1 code implementation • CVPR 2024 • Yuyin Zhou, Xianhang Li, Fengze Liu, Qingyue Wei, Xuxi Chen, Lequan Yu, Cihang Xie, Matthew P. Lungren, Lei Xing
Extensive experiments demonstrate that our method effectively mitigates the challenges of noisy labels, often necessitating few to no validation samples, and is well generalized to other tasks such as image segmentation.
Ranked #8 on Image Classification on Clothing1M (using clean data) (using extra training data)
no code implementations • 29 Jan 2022 • Varun Vasudevan, Maxime Bassenne, Md Tauhidul Islam, Lei Xing
On the contrary, this study investigates image classification using graphs generated from an image-specific number of multiscale superpixels.
no code implementations • 3 Dec 2021 • Shuai Shao, Lei Xing, Wei Yu, Rui Xu, Yanjiang Wang, BaoDi Liu
Inspired by the concept of self-supervised learning (e. g., setting the pretext task to generate a universal model for the downstream task), we propose a Self-Supervised Dictionary Learning (SSDL) framework to address this challenge.
no code implementations • 1 Dec 2021 • Shuai Shao, Lei Xing, Rui Xu, Weifeng Liu, Yan-Jiang Wang, Bao-Di Liu
Inspired by this assumption, we propose a novel method Multi-Decision Fusing Model (MDFM), which comprehensively considers the decisions based on multiple FEMs to enhance the efficacy and robustness of the model.
no code implementations • 23 Nov 2021 • Yuyin Zhou, Shih-Cheng Huang, Jason Alan Fries, Alaa Youssef, Timothy J. Amrhein, Marcello Chang, Imon Banerjee, Daniel Rubin, Lei Xing, Nigam Shah, Matthew P. Lungren
Despite the routine use of electronic health record (EHR) data by radiologists to contextualize clinical history and inform image interpretation, the majority of deep learning architectures for medical imaging are unimodal, i. e., they only learn features from pixel-level information.
1 code implementation • NeurIPS Workshop Deep_Invers 2021 • Yang song, Liyue Shen, Lei Xing, Stefano Ermon
These measurements are typically synthesized from images using a fixed physical model of the measurement process, which hinders the generalization capability of models to unknown measurement processes.
no code implementations • 28 Sep 2021 • Lequan Yu, Zhicheng Zhang, Xiaomeng Li, Hongyi Ren, Wei Zhao, Lei Xing
We then design a novel FBP reconstruction loss to encourage the network to generate more perfect completion results and a residual-learning-based image refinement module to reduce the secondary artifacts in the reconstructed CT images.
no code implementations • 16 Sep 2021 • Shuai Shao, Lei Xing, Yan Wang, Rui Xu, Chunyan Zhao, Yan-Jiang Wang, Bao-Di Liu
Apply the trained FEM to acquire the novel data's features and recognize them.
no code implementations • 7 Sep 2021 • Shuai Shao, Lei Xing, Yixin Chen, Yan-Jiang Wang, Bao-Di Liu, Yicong Zhou
(2) Use the FEM to extract the features of novel data (with few labeled samples and totally different categories from base data), then classify them with the to-be-designed classifier.
1 code implementation • NeurIPS Workshop Deep_Invers 2021 • Liyue Shen, John Pauly, Lei Xing
The method differs fundamentally from previous deep learning-based image reconstruction approaches in that NeRP exploits the internal information in an image prior, and the physics of the sparsely sampled measurements to produce a representation of the unknown subject.
no code implementations • 25 May 2021 • Liyue Shen, Wei Zhao, Dante Capaldi, John Pauly, Lei Xing
Deep learning affords enormous opportunities to augment the armamentarium of biomedical imaging, albeit its design and implementation have potential flaws.
1 code implementation • 29 Mar 2021 • Junfei Xiao, Lequan Yu, Zongwei Zhou, Yutong Bai, Lei Xing, Alan Yuille, Yuyin Zhou
We propose a new normalization strategy, named categorical normalization (CateNorm), to normalize the activations according to categorical statistics.
1 code implementation • 28 Feb 2021 • Zhicheng Zhang, Lequan Yu, Xiaokun Liang, Wei Zhao, Lei Xing
Low dose computed tomography (LDCT) has attracted more and more attention in routine clinical diagnosis assessment, therapy planning, etc., which can reduce the dose of X-ray radiation to patients.
no code implementations • 1 Jan 2021 • Maxime Bassenne, Varun Vasudevan, Lei Xing
In this study, we investigate learning from a new principled representation in which individual images are represented by an image-specific number of multiscale superpixels.
no code implementations • 20 Oct 2020 • Qiong Xu, Jeff Wang, Hiroki Shirato, Lei Xing
Parameters for dictionary learning and sparse representation are determined according to the structural and noise properties of each region.
no code implementations • 16 Sep 2020 • Lequan Yu, Zhicheng Zhang, Xiaomeng Li, Lei Xing
Computed tomography (CT) has been widely used for medical diagnosis, assessment, and therapy planning and guidance.
1 code implementation • 21 Jul 2020 • Xiaomeng Li, Mengyu Jia, Md Tauhidul Islam, Lequan Yu, Lei Xing
The automatic diagnosis of various retinal diseases from fundus images is important to support clinical decision-making.
no code implementations • 10 Jul 2020 • Liyue Shen, Wentao Zhu, Xiaosong Wang, Lei Xing, John M. Pauly, Baris Turkbey, Stephanie Anne Harmon, Thomas Hogue Sanford, Sherif Mehralivand, Peter Choyke, Bradford Wood, Daguang Xu
Multi-domain data are widely leveraged in vision applications taking advantage of complementary information from different modalities, e. g., brain tumor segmentation from multi-parametric magnetic resonance imaging (MRI).
no code implementations • 23 Jun 2020 • Masoud Badiei Khuzani, Yinyu Ye, Sandy Napel, Lei Xing
In particular, we prove that in the scaling limits, the empirical measure of the Langevin particles converges to the law of a reflected It\^{o} diffusion-drift process.
no code implementations • 23 Nov 2019 • Charles Huang, Masoud Badiei, Hyunseok Seo, Ming Ma, Xiaokun Liang, Dante Capaldi, Michael Gensheimer, Lei Xing
Whereas supervised segmentation methods only automate the segmentation process for a select few number of OARs, we demonstrate that our methods can achieve similar performance for OARs of interest, while also providing segmentations for every other OAR on the provided atlas.
no code implementations • 6 Nov 2019 • Hyunseok Seo, Masoud Badiei Khuzani, Varun Vasudevan, Charles Huang, Hongyi Ren, Ruoxiu Xiao, Xiao Jia, Lei Xing
In recent years, significant progress has been made in developing more accurate and efficient machine learning algorithms for segmentation of medical and natural images.
no code implementations • 31 Oct 2019 • Hyunseok Seo, Charles Huang, Maxime Bassenne, Ruoxiu Xiao, Lei Xing
To cope with these problems, we added a residual path with deconvolution and activation operations to the skip connection of the U-Net to avoid duplication of low resolution information of features.
no code implementations • 25 Sep 2019 • Masoud Badiei Khuzani, Liyue Shen, Shahin Shahrampour, Lei Xing
We subsequently leverage a particle stochastic gradient descent (SGD) method to solve the derived finite dimensional optimization problem.
no code implementations • 25 Sep 2019 • Masoud Badiei Khuzani, Liyue Shen, Shahin Shahrampour, Lei Xing
We subsequently leverage a particle stochastic gradient descent (SGD) method to solve finite dimensional optimization problems.
no code implementations • 30 Jun 2019 • Xiaomeng Li, Lequan Yu, Yueming Jin, Chi-Wing Fu, Lei Xing, Pheng-Ann Heng
Rare diseases have extremely low-data regimes, unlike common diseases with large amount of available labeled data.
no code implementations • 15 Mar 2019 • Masoud Badiei Khuzani, Varun Vasudevan, Hongyi Ren, Lei Xing
We compute the actions of a policy that is nearly as good as a policy chosen by a suitable oracle from a given mixture policy class characterized by the convex hull of a set of known base policies.
no code implementations • 28 Feb 2019 • Xiaomeng Li, Lequan Yu, Hao Chen, Chi-Wing Fu, Lei Xing, Pheng-Ann Heng
In this paper, we present a novel semi-supervised method for medical image segmentation, where the network is optimized by the weighted combination of a common supervised loss for labeled inputs only and a regularization loss for both labeled and unlabeled data.
no code implementations • 27 Feb 2019 • Masoud Badiei Khuzani, Hongyi Ren, Md Tauhidul Islam, Lei Xing
Specifically, we consider a distributionally robust optimization of the kernel-target alignment with respect to the distribution of training samples over a distributional ball defined by the Kullback-Leibler (KL) divergence.
no code implementations • 11 Oct 2017 • Badong Chen, Lei Xing, Nanning Zheng, Jose C. Príncipe
Comparing with traditional learning criteria, such as mean square error (MSE), the minimum error entropy (MEE) criterion is superior in nonlinear and non-Gaussian signal processing and machine learning.
2 code implementations • 31 May 2017 • Morteza Mardani, Enhao Gong, Joseph Y. Cheng, Shreyas Vasanawala, Greg Zaharchuk, Marcus Alley, Neil Thakur, Song Han, William Dally, John M. Pauly, Lei Xing
A multilayer convolutional neural network is then jointly trained based on diagnostic quality images to discriminate the projection quality.
no code implementations • 23 Mar 2017 • Badong Chen, Lei Xing, Haiquan Zhao, Bin Xu, Jose C. Principe
The maximum correntropy criterion (MCC) has recently been successfully applied in robust regression, classification and adaptive filtering, where the correntropy is maximized instead of minimizing the well-known mean square error (MSE) to improve the robustness with respect to outliers (or impulsive noises).
no code implementations • 21 Dec 2016 • Badong Chen, Lei Xing, Xin Wang, Jing Qin, Nanning Zheng
Correntropy is a second order statistical measure in kernel space, which has been successfully applied in robust learning and signal processing.
no code implementations • 1 Aug 2016 • Badong Chen, Lei Xing, Bin Xu, Haiquan Zhao, Nanning Zheng, Jose C. Principe
Nonlinear similarity measures defined in kernel space, such as correntropy, can extract higher-order statistics of data and offer potentially significant performance improvement over their linear counterparts especially in non-Gaussian signal processing and machine learning.
no code implementations • 12 Apr 2015 • Badong Chen, Lei Xing, Haiquan Zhao, Nanning Zheng, José C. Príncipe
In this work, we propose a generalized correntropy that adopts the generalized Gaussian density (GGD) function as the kernel (not necessarily a Mercer kernel), and present some important properties.