1 code implementation • 15 Dec 2023 • Xiangde Luo, Jia Fu, Yunxin Zhong, Shuolin Liu, Bing Han, Mehdi Astaraki, Simone Bendazzoli, Iuliana Toma-Dasu, Yiwen Ye, Ziyang Chen, Yong Xia, Yanzhou Su, Jin Ye, Junjun He, Zhaohu Xing, Hongqiu Wang, Lei Zhu, Kaixiang Yang, Xin Fang, Zhiwei Wang, Chan Woong Lee, Sang Joon Park, Jaehee Chun, Constantin Ulrich, Klaus H. Maier-Hein, Nchongmaje Ndipenoch, Alina Miron, Yongmin Li, Yimeng Zhang, Yu Chen, Lu Bai, Jinlong Huang, Chengyang An, Lisheng Wang, Kaiwen Huang, Yunqi Gu, Tao Zhou, Mu Zhou, Shichuan Zhang, Wenjun Liao, Guotai Wang, Shaoting Zhang
The precise delineation of Gross Tumor Volumes (GTVs) and Organs-At-Risk (OARs) is crucial in radiation treatment, directly impacting patient prognosis.
1 code implementation • 27 Aug 2023 • Lanshan He, Yusheng Liu, Lisheng Wang
Dental panoramic x-rays are commonly used in dental diagnosing.
1 code implementation • 18 Aug 2023 • Yusheng Liu, Rui Xin, Tao Yang, Lisheng Wang
Inferior Alveolar Nerve (IAN) canal detection in CBCT is an important step in many dental and maxillofacial surgery applications to prevent irreversible damage to the nerve during the procedure. The ToothFairy2023 Challenge aims to establish a 3D maxillofacial dataset consisting of all sparse labels and partial dense labels, and improve the ability of automatic IAN segmentation.
1 code implementation • 5 Jul 2023 • Nicholas Heller, Fabian Isensee, Dasha Trofimova, Resha Tejpaul, Zhongchen Zhao, Huai Chen, Lisheng Wang, Alex Golts, Daniel Khapun, Daniel Shats, Yoel Shoshan, Flora Gilboa-Solomon, Yasmeen George, Xi Yang, Jianpeng Zhang, Jing Zhang, Yong Xia, Mengran Wu, Zhiyang Liu, Ed Walczak, Sean McSweeney, Ranveer Vasdev, Chris Hornung, Rafat Solaiman, Jamee Schoephoerster, Bailey Abernathy, David Wu, Safa Abdulkadir, Ben Byun, Justice Spriggs, Griffin Struyk, Alexandra Austin, Ben Simpson, Michael Hagstrom, Sierra Virnig, John French, Nitin Venkatesh, Sarah Chan, Keenan Moore, Anna Jacobsen, Susan Austin, Mark Austin, Subodh Regmi, Nikolaos Papanikolopoulos, Christopher Weight
Overall KiTS21 facilitated a significant advancement in the state of the art in kidney tumor segmentation, and provides useful insights that are applicable to the field of semantic segmentation as a whole.
no code implementations • 23 Mar 2023 • Yi Lin, Zhongchen Zhao, Zhengjie ZHU, Lisheng Wang, Kwang-Ting Cheng, Hao Chen
Multiple instance learning (MIL) has emerged as a popular method for classifying histopathology whole slide images (WSIs).
no code implementations • 14 Mar 2023 • Tao Yang, Lisheng Wang
If ceT1 scans and their annotations can be used for unsupervised learning of hrT2 scans, the performance of Koos classifi-cation using unlabeled hrT2 scans will be greatly improved.
no code implementations • 7 Feb 2023 • Huai Chen, Xiuying Wang, Lisheng Wang
Accordingly, the 3D region discrimination loss is firstly proposed to learn the discriminative representation measuring voxel-wise similarities and cluster semantically consistent voxels to form the candidate 3D vascular segmentation in unlabeled images; secondly, based on the similarity of the tree-shaped morphology between 2D and 3D vessels, the Crop-and-Overlap strategy is presented to generate reference masks from 2D structure-agnostic vessel annotations, which are fit for varied vascular structures, and the adversarial loss is introduced to guide the tree-shaped morphology of 3D vessels; thirdly, the temporal consistency loss is proposed to foster the training stability and keep the model updated smoothly.
no code implementations • 19 Jul 2022 • Yusheng Liu, Zhongchen Zhao, Lisheng Wang
Three-dimensional (3D) kidney parsing on computed tomography angiography (CTA) images is of great clinical significance.
no code implementations • 20 Apr 2022 • Kelly Payette, Hongwei Li, Priscille de Dumast, Roxane Licandro, Hui Ji, Md Mahfuzur Rahman Siddiquee, Daguang Xu, Andriy Myronenko, Hao liu, Yuchen Pei, Lisheng Wang, Ying Peng, Juanying Xie, Huiquan Zhang, Guiming Dong, Hao Fu, Guotai Wang, ZunHyan Rieu, Donghyeon Kim, Hyun Gi Kim, Davood Karimi, Ali Gholipour, Helena R. Torres, Bruno Oliveira, João L. Vilaça, Yang Lin, Netanell Avisdris, Ori Ben-Zvi, Dafna Ben Bashat, Lucas Fidon, Michael Aertsen, Tom Vercauteren, Daniel Sobotka, Georg Langs, Mireia Alenyà, Maria Inmaculada Villanueva, Oscar Camara, Bella Specktor Fadida, Leo Joskowicz, Liao Weibin, Lv Yi, Li Xuesong, Moona Mazher, Abdul Qayyum, Domenec Puig, Hamza Kebiri, Zelin Zhang, Xinyi Xu, Dan Wu, Kuanlun Liao, Yixuan Wu, Jintai Chen, Yunzhi Xu, Li Zhao, Lana Vasung, Bjoern Menze, Meritxell Bach Cuadra, Andras Jakab
Automatic segmentation of the developing fetal brain is a vital step in the quantitative analysis of prenatal neurodevelopment both in the research and clinical context.
1 code implementation • 21 Aug 2021 • Huai Chen, Renzhen Wang, Xiuying Wang, Jieyu Li, Qu Fang, Hui Li, Jianhao Bai, Qing Peng, Deyu Meng, Lisheng Wang
To address this challenge, in this paper, we propose a general unsupervised representation learning framework, named local discrimination (LD), to learn local discriminative features for medical images by closely embedding semantically similar pixels and identifying regions of similar structures across different images.
1 code implementation • 17 Dec 2020 • Huai Chen, Jieyu Li, Renzhen Wang, YiJie Huang, Fanrui Meng, Deyu Meng, Qing Peng, Lisheng Wang
However, the commonly applied supervised representation learning methods require a large amount of annotated data, and unsupervised discriminative representation learning distinguishes different images by learning a global feature, both of which are not suitable for localized medical image analysis tasks.
no code implementations • 10 Dec 2020 • Guoqing Bao, Huai Chen, Tongliang Liu, Guanzhong Gong, Yong Yin, Lisheng Wang, Xiuying Wang
In this paper, we present an end-to-end multitask learning (MTL) framework (COVID-MTL) that is capable of automated and simultaneous detection (against both radiology and NAT) and severity assessment of COVID-19.
no code implementations • 25 Dec 2018 • Huai Chen, Yuxiao Qi, Yong Yin, Tengxiang Li, Xiaoqing Liu, Xiuli Li, Guanzhong Gong, Lisheng Wang
Therefore, a multi-modality MRI fusion network (MMFNet) based on three modalities of MRI (T1, T2 and contrast-enhanced T1) is proposed to complete accurate segmentation of NPC.
2 code implementations • 27 Jun 2018 • Yi-Jie Huang, Qi Dou, Zi-Xian Wang, Li-Zhi Liu, Ying Jin, Chao-Feng Li, Lisheng Wang, Hao Chen, Rui-Hua Xu
With the region proposals from the encoder, we crop multi-level RoI in-region features from the encoder to form a GPU memory-efficient decoder for detailpreserving segmentation and therefore enlarged applicable volume size and effective receptive field.
no code implementations • 27 Sep 2017 • Heran Yang, Jian Sun, Huibin Li, Lisheng Wang, Zongben Xu
There are two major challenges in this category of methods, i. e., atlas selection and label fusion.