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Found 20 papers, 8 papers with code
DLTK: State of the Art Reference Implementations for Deep Learning on Medical Images
We present DLTK, a toolkit providing baseline implementations for efficient experimentation with deep learning methods on biomedical images.
Distance Metric Learning using Graph Convolutional Networks: Application to Functional Brain Networks
Evaluating similarity between graphs is of major importance in several computer vision and pattern recognition problems, where graph representations are often used to model objects or interactions between elements.
Automated cardiovascular magnetic resonance image analysis with fully convolutional networks
By combining FCN with a large-scale annotated dataset, the proposed automated method achieves a high performance on par with human experts in segmenting the LV and RV on short-axis CMR images and the left atrium (LA) and right atrium (RA) on long-axis CMR images.
NeuroNet: Fast and Robust Reproduction of Multiple Brain Image Segmentation Pipelines
NeuroNet is a deep convolutional neural network mimicking multiple popular and state-of-the-art brain segmentation tools including FSL, SPM, and MALPEM.
Implicit Weight Uncertainty in Neural Networks
Modern neural networks tend to be overconfident on unseen, noisy or incorrectly labelled data and do not produce meaningful uncertainty measures.
PVR: Patch-to-Volume Reconstruction for Large Area Motion Correction of Fetal MRI
In this paper we present a novel method for the correction of motion artifacts that are present in fetal Magnetic Resonance Imaging (MRI) scans of the whole uterus.
Identifying the Best Machine Learning Algorithms for Brain Tumor Segmentation, Progression Assessment, and Overall Survival Prediction in the BRATS Challenge
This study assesses the state-of-the-art machine learning (ML) methods used for brain tumor image analysis in mpMRI scans, during the last seven instances of the International Brain Tumor Segmentation (BraTS) challenge, i. e., 2012-2018.
Deep Generative Models in the Real-World: An Open Challenge from Medical Imaging
In this paper, we explore the feasibility of using state-of-the-art auto-encoder-based deep generative models, such as variational and adversarial auto-encoders, for one such task: abnormality detection in medical imaging.
Ensembles of Multiple Models and Architectures for Robust Brain Tumour Segmentation
Deep learning approaches such as convolutional neural nets have consistently outperformed previous methods on challenging tasks such as dense, semantic segmentation.
Employing Weak Annotations for Medical Image Analysis Problems
To efficiently establish training databases for machine learning methods, collaborative and crowdsourcing platforms have been investigated to collectively tackle the annotation effort.
DeepCut: Object Segmentation from Bounding Box Annotations using Convolutional Neural Networks
In this paper, we propose DeepCut, a method to obtain pixelwise object segmentations given an image dataset labelled with bounding box annotations.
Learning under Distributed Weak Supervision
The availability of training data for supervision is a frequently encountered bottleneck of medical image analysis methods.
Multi-Atlas Segmentation using Partially Annotated Data: Methods and Annotation Strategies
Multi-atlas segmentation is a widely used tool in medical image analysis, providing robust and accurate results by learning from annotated atlas datasets.
A Proximal Bregman Projection Approach to Continuous Max-Flow Problems Using Entropic Distances
One issue limiting the adaption of large-scale multi-region segmentation is the sometimes prohibitive memory requirements.
A Continuous Max-Flow Approach to Multi-Labeling Problems under Arbitrary Region Regularization
The incorporation of region regularization into max-flow segmentation has traditionally focused on ordering and part-whole relationships.
A Continuous Max-Flow Approach to General Hierarchical Multi-Labeling Problems
Multi-region segmentation algorithms often have the onus of incorporating complex anatomical knowledge representing spatial or geometric relationships between objects, and general-purpose methods of addressing this knowledge in an optimization-based manner have thus been lacking.
RANCOR: Non-Linear Image Registration with Total Variation Regularization
Optimization techniques have been widely used in deformable registration, allowing for the incorporation of similarity metrics with regularization mechanisms.
Learning Interpretable Anatomical Features Through Deep Generative Models: Application to Cardiac Remodeling
However, current approaches to the diagnosis of cardiovascular diseases often rely on subjective human assessment as well as manual analysis of medical images.
Weakly Supervised Estimation of Shadow Confidence Maps in Fetal Ultrasound Imaging
Our method is more consistent than human annotation, and outperforms the state-of-the-art quantitatively in shadow segmentation and qualitatively in confidence estimation of shadow regions.
Efficient 3D Endfiring TRUS Prostate Segmentation with Globally Optimized Rotational Symmetry
Segmenting 3D endfiring transrectal ultrasound (TRUS) prostate images efficiently and accurately is of utmost importance for the planning and guiding 3D TRUS guided prostate biopsy.
