1 code implementation • 10 May 2024 • Hartmut Häntze, Lina Xu, Christian J. Mertens, Felix J. Dorfner, Leonhard Donle, Felix Busch, Avan Kader, Sebastian Ziegelmayer, Nadine Bayerl, Nassir Navab, Daniel Rueckert, Julia Schnabel, Hugo JWL Aerts, Daniel Truhn, Fabian Bamberg, Jakob Weiß, Christopher L. Schlett, Steffen Ringhof, Thoralf Niendorf, Tobias Pischon, Hans-Ulrich Kauczor, Tobias Nonnenmacher, Thomas Kröncke, Henry Völzke, Jeanette Schulz-Menger, Klaus Maier-Hein, Mathias Prokop, Bram van Ginneken, Alessa Hering, Marcus R. Makowski, Lisa C. Adams, Keno K. Bressem
A human-in-the-loop annotation workflow was employed, leveraging cross-modality transfer learning from an existing CT segmentation model to segment 40 anatomical structures.
1 code implementation • 8 Nov 2023 • Gabriel Efrain Humpire-Mamani, Colin Jacobs, Mathias Prokop, Bram van Ginneken, Nikolas Lessmann
A base segmentation model (3D U-Net) was trained on a large and sparsely annotated dataset; its weights were used for transfer learning on four new down-stream segmentation tasks for which a fully annotated dataset was available.
no code implementations • 6 Sep 2023 • Gabriel Efrain Humpire Mamani, Nikolas Lessmann, Ernst Th. Scholten, Mathias Prokop, Colin Jacobs, Bram van Ginneken
Our end-to-end segmentation method was trained on 215 contrast-enhanced thoracic-abdominal CT scans, with half of these scans containing one or more abnormalities.
no code implementations • 3 May 2021 • Ecem Sogancioglu, Keelin Murphy, Ernst Th. Scholten, Luuk H. Boulogne, Mathias Prokop, Bram van Ginneken
The optimal models were tested on 291 CXR studies with reference lung volume obtained from PFT.
no code implementations • 23 Dec 2016 • Arnaud Arindra Adiyoso Setio, Alberto Traverso, Thomas de Bel, Moira S. N. Berens, Cas van den Bogaard, Piergiorgio Cerello, Hao Chen, Qi Dou, Maria Evelina Fantacci, Bram Geurts, Robbert van der Gugten, Pheng Ann Heng, Bart Jansen, Michael M. J. de Kaste, Valentin Kotov, Jack Yu-Hung Lin, Jeroen T. M. C. Manders, Alexander Sónora-Mengana, Juan Carlos García-Naranjo, Evgenia Papavasileiou, Mathias Prokop, Marco Saletta, Cornelia M Schaefer-Prokop, Ernst T. Scholten, Luuk Scholten, Miranda M. Snoeren, Ernesto Lopez Torres, Jef Vandemeulebroucke, Nicole Walasek, Guido C. A. Zuidhof, Bram van Ginneken, Colin Jacobs
We have therefore set up the LUNA16 challenge, an objective evaluation framework for automatic nodule detection algorithms using the largest publicly available reference database of chest CT scans, the LIDC-IDRI data set.
no code implementations • 28 Oct 2016 • Francesco Ciompi, Kaman Chung, Sarah J. van Riel, Arnaud Arindra Adiyoso Setio, Paul K. Gerke, Colin Jacobs, Ernst Th. Scholten, Cornelia Schaefer-Prokop, Mathilde M. W. Wille, Alfonso Marchiano, Ugo Pastorino, Mathias Prokop, Bram van Ginneken
The introduction of lung cancer screening programs will produce an unprecedented amount of chest CT scans in the near future, which radiologists will have to read in order to decide on a patient follow-up strategy.