Search Results for author: Minsi Ren

Found 4 papers, 2 papers with code

From Theory to Therapy: Reframing SBDD Model Evaluation via Practical Metrics

1 code implementation13 Jun 2024 Bowen Gao, Haichuan Tan, Yanwen Huang, Minsi Ren, Xiao Huang, Wei-Ying Ma, Ya-Qin Zhang, Yanyan Lan

Recent advancements in structure-based drug design (SBDD) have significantly enhanced the efficiency and precision of drug discovery by generating molecules tailored to bind specific protein pockets.

Drug Design Drug Discovery

Rethinking Specificity in SBDD: Leveraging Delta Score and Energy-Guided Diffusion

no code implementations4 Mar 2024 Bowen Gao, Minsi Ren, Yuyan Ni, Yanwen Huang, Bo Qiang, Zhi-Ming Ma, Wei-Ying Ma, Yanyan Lan

In the field of Structure-based Drug Design (SBDD), deep learning-based generative models have achieved outstanding performance in terms of docking score.

Contrastive Learning Drug Design +1

Delta Score: Improving the Binding Assessment of Structure-Based Drug Design Methods

no code implementations1 Nov 2023 Minsi Ren, Bowen Gao, Bo Qiang, Yanyan Lan

Structure-based drug design (SBDD) stands at the forefront of drug discovery, emphasizing the creation of molecules that target specific binding pockets.

Drug Design Drug Discovery

DrugCLIP: Contrastive Protein-Molecule Representation Learning for Virtual Screening

1 code implementation10 Oct 2023 Bowen Gao, Bo Qiang, Haichuan Tan, Minsi Ren, Yinjun Jia, Minsi Lu, Jingjing Liu, WeiYing Ma, Yanyan Lan

Virtual screening, which identifies potential drugs from vast compound databases to bind with a particular protein pocket, is a critical step in AI-assisted drug discovery.

Contrastive Learning Data Augmentation +3

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