no code implementations • 5 Aug 2024 • Perla Mayo, Matteo Cencini, Carolin M. Pirkl, Marion I. Menzel, Michela Tosetti, Bjoern H. Menze, Mohammad Golbabaee
Magnetic Resonance Fingerprinting (MRF) is a time-efficient approach to quantitative MRI for multiparametric tissue mapping.
no code implementations • 29 Jul 2024 • Perla Mayo, Matteo Cencini, Ketan Fatania, Carolin M. Pirkl, Marion I. Menzel, Bjoern H. Menze, Michela Tosetti, Mohammad Golbabaee
The estimation of multi-parametric quantitative maps from Magnetic Resonance Fingerprinting (MRF) compressed sampled acquisitions, albeit successful, remains a challenge due to the high underspampling rate and artifacts naturally occuring during image reconstruction.
no code implementations • 19 Jun 2023 • Holly Wilson, Scott Wellington, Foteini Simistira Liwicki, Vibha Gupta, Rajkumar Saini, Kanjar De, Nosheen Abid, Sumit Rakesh, Johan Eriksson, Oliver Watts, Xi Chen, Mohammad Golbabaee, Michael J. Proulx, Marcus Liwicki, Eamonn O'Neill, Benjamin Metcalfe
Decoding inner speech from the brain signal via hybridisation of fMRI and EEG data is explored to investigate the performance benefits over unimodal models.
no code implementations • 23 Nov 2022 • Ketan Fatania, Kwai Y. Chau, Carolin M. Pirkl, Marion I. Menzel, Peter Hall, Mohammad Golbabaee
This paper proposes NonLinear Equivariant Imaging (NLEI), a self-supervised learning approach to eliminate the need for ground truth for deep MRF image reconstruction.
1 code implementation • 10 Feb 2022 • Ketan Fatania, Carolin M. Pirkl, Marion I. Menzel, Peter Hall, Mohammad Golbabaee
This paper proposes an iterative deep learning plug-and-play reconstruction approach to MRF which is adaptive to the forward acquisition process.
no code implementations • 23 Jan 2022 • Dongdong Chen, Mike E. Davies, Mohammad Golbabaee
Magnetic Resonance Fingerprinting (MRF) has emerged as a promising quantitative MR imaging approach.
Magnetic Resonance Fingerprinting Rolling Shutter Correction
1 code implementation • 23 Nov 2020 • Mohammad Golbabaee, Clarice Poon
We propose a novel numerical approach to separate multiple tissue compartments in image voxels and to estimate quantitatively their nuclear magnetic resonance (NMR) properties and mixture fractions, given magnetic resonance fingerprinting (MRF) measurements.
1 code implementation • 27 Jun 2020 • Dongdong Chen, Mike E. Davies, Mohammad Golbabaee
Consistency of the predictions with respect to the physical forward model is pivotal for reliably solving inverse problems.
1 code implementation • 23 Jan 2020 • Mohammad Golbabaee, Guido Buonincontri, Carolin Pirkl, Marion Menzel, Bjoern Menze, Mike Davies, Pedro Gomez
We propose a dictionary-matching-free pipeline for multi-parametric quantitative MRI image computing.
no code implementations • 22 Oct 2019 • Junqi Tang, Karen Egiazarian, Mohammad Golbabaee, Mike Davies
We investigate this phenomenon and propose a theory-inspired mechanism for the practitioners to efficiently characterize whether it is beneficial for an inverse problem to be solved by stochastic optimization techniques or not.
no code implementations • 26 Feb 2019 • Mohammad Golbabaee, Carolin M. Pirkl, Marion I. Menzel, Guido Buonincontri, Pedro A. Gómez
Deep learning (DL) has recently emerged to address the heavy storage and computation requirements of the baseline dictionary-matching (DM) for Magnetic Resonance Fingerprinting (MRF) reconstruction.
1 code implementation • 3 Oct 2018 • Mohammad Golbabaee, Zhouye Chen, Yves Wiaux, Mike Davies
Current popular methods for Magnetic Resonance Fingerprint (MRF) recovery are bottlenecked by the heavy computations of a matched-filtering step due to the growing size and complexity of the fingerprint dictionaries in multi-parametric quantitative MRI applications.
no code implementations • 6 Sep 2018 • Mohammad Golbabaee, Zhouye Chen, Yves Wiaux, Mike E. Davies
Current proposed solutions for the high dimensionality of the MRF reconstruction problem rely on a linear compression step to reduce the matching computations and boost the efficiency of fast but non-scalable searching schemes such as the KD-trees.
no code implementations • 6 Sep 2018 • Arnold Julian Vinoj Benjamin, Pedro A. Gómez, Mohammad Golbabaee, Tim Sprenger, Marion I. Menzel, Mike E. Davies, Ian Marshall
The main purpose of this study is to show that a highly accelerated Cartesian MRF scheme using a multi-shot EPI readout (i. e. multi-shot EPI-MRF) can produce good quality multi-parametric maps such as T1, T2 and proton density (PD) in a sufficiently short scan duration that is similar to conventional MRF.
no code implementations • 5 Sep 2018 • Mohammad Golbabaee, Dong-Dong Chen, Pedro A. Gómez, Marion I. Menzel, Mike E. Davies
Current popular methods for Magnetic Resonance Fingerprint (MRF) recovery are bottlenecked by the heavy storage and computation requirements of a dictionary-matching (DM) step due to the growing size and complexity of the fingerprint dictionaries in multi-parametric quantitative MRI applications.
no code implementations • 23 Jun 2017 • Mohammad Golbabaee, Zhouye Chen, Yves Wiaux, Mike E. Davies
We adopt data structure in the form of cover trees and iteratively apply approximate nearest neighbour (ANN) searches for fast compressed sensing reconstruction of signals living on discrete smooth manifolds.