Improving Targeted Molecule Generation through Language Model Fine-Tuning Via Reinforcement Learning

no code implementations • 10 May 2024 • Salma J. Ahmed, Mustafa A. Elattar

Developing new drugs is laborious and costly, demanding extensive time investment.

Drug Design Language Modeling +2

QUBIQ: Uncertainty Quantification for Biomedical Image Segmentation Challenge

no code implementations • 19 Mar 2024 • Hongwei Bran Li, Fernando Navarro, Ivan Ezhov, Amirhossein Bayat, Dhritiman Das, Florian Kofler, Suprosanna Shit, Diana Waldmannstetter, Johannes C. Paetzold, Xiaobin Hu, Benedikt Wiestler, Lucas Zimmer, Tamaz Amiranashvili, Chinmay Prabhakar, Christoph Berger, Jonas Weidner, Michelle Alonso-Basant, Arif Rashid, Ujjwal Baid, Wesam Adel, Deniz Ali, Bhakti Baheti, Yingbin Bai, Ishaan Bhatt, Sabri Can Cetindag, WenTing Chen, Li Cheng, Prasad Dutand, Lara Dular, Mustafa A. Elattar, Ming Feng, Shengbo Gao, Henkjan Huisman, Weifeng Hu, Shubham Innani, Wei Jiat, Davood Karimi, Hugo J. Kuijf, Jin Tae Kwak, Hoang Long Le, Xiang Lia, Huiyan Lin, Tongliang Liu, Jun Ma, Kai Ma, Ting Ma, Ilkay Oksuz, Robbie Holland, Arlindo L. Oliveira, Jimut Bahan Pal, Xuan Pei, Maoying Qiao, Anindo Saha, Raghavendra Selvan, Linlin Shen, Joao Lourenco Silva, Ziga Spiclin, Sanjay Talbar, Dadong Wang, Wei Wang, Xiong Wang, Yin Wang, Ruiling Xia, Kele Xu, Yanwu Yan, Mert Yergin, Shuang Yu, Lingxi Zeng, Yinglin Zhang, Jiachen Zhao, Yefeng Zheng, Martin Zukovec, Richard Do, Anton Becker, Amber Simpson, Ender Konukoglu, Andras Jakab, Spyridon Bakas, Leo Joskowicz, Bjoern Menze

The challenge focuses on the uncertainty quantification of medical image segmentation which considers the omnipresence of inter-rater variability in imaging datasets.

Image Segmentation Medical Image Segmentation +3

Deep Convolutional Encoder-Decoders with Aggregated Multi-Resolution Skip Connections for Skin Lesion Segmentation

no code implementations • 26 Jan 2019 • Ahmed H. Shahin, Karim Amer, Mustafa A. Elattar

The prevalence of skin melanoma is rapidly increasing as well as the recorded death cases of its patients.

Decoder Image Segmentation +5