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Found 8 papers, 3 papers with code
Inference of Sparse Networks with Unobserved Variables. Application to Gene Regulatory Networks
Networks are a unifying framework for modeling complex systems and network inference problems are frequently encountered in many fields.
Convex Total Least Squares
The special case when all dependent and independent variables have the same level of uncorrelated Gaussian noise, known as ordinary TLS, can be solved by singular value decomposition (SVD).
Quantifying homologous proteins and proteoforms
Many proteoforms - arising from alternative splicing, post-translational modifications (PTMs), or paralogous genes - have distinct biological functions, such as histone PTM proteoforms.
Analyzing ribosome remodeling in health and disease
regulation largely unexplored, in part due to methodological limitations.
New views of old proteins: clarifying the enigmatic proteome
All human diseases involve proteins, yet our current tools to characterize and quantify them are limited.
Initial recommendations for performing, benchmarking, and reporting single-cell proteomics experiments
Analyzing proteins from single cells by tandem mass spectrometry (MS) has become technically feasible.
Sampling the proteome by emerging single-molecule and mass-spectrometry methods
Mammalian cells have about 30, 000-fold more protein molecules than mRNA molecules.
Modeling and interpretation of single-cell proteogenomic data
Biological functions stem from coordinated interactions among proteins, nucleic acids and small molecules.
