no code implementations • 28 May 2023 • Magdalena Wysocka, Oskar Wysocki, Maxime Delmas, Vincent Mutel, Andre Freitas
The results show that while LLMs are currently not fit for purpose to be used as biomedical factual knowledge bases, there is a promising emerging property in the direction of factuality as the models become domain specialised, scale-up in size and level of human feedback.
no code implementations • 6 Mar 2023 • Hanadi Mardah, Oskar Wysocki, Markel Vigo, Andre Freitas
Therefore, AGs were considered to deliver a more critical approach to argument interpretation, especially with unfamiliar topics.
no code implementations • 2 Jul 2022 • Magdalena Wysocka, Oskar Wysocki, Marie Zufferey, Dónal Landers, André Freitas
We discuss the recent evolutionary arch of DL models in the direction of integrating prior biological relational and network knowledge to support better generalisation (e. g. pathways or Protein-Protein-Interaction networks) and interpretability.
no code implementations • 20 Jun 2022 • Alex Bogatu, Magdalena Wysocka, Oskar Wysocki, Holly Butterworth, Donal Landers, Elaine Kilgour, Andre Freitas
Cytokine release syndrome (CRS), also known as cytokine storm, is one of the most consequential adverse effects of chimeric antigen receptor therapies that have shown promising results in cancer treatment.
1 code implementation • 11 Apr 2022 • Oskar Wysocki, Jessica Katharine Davies, Markel Vigo, Anne Caroline Armstrong, Dónal Landers, Rebecca Lee, André Freitas
This paper contributes with a pragmatic evaluation framework for explainable Machine Learning (ML) models for clinical decision support.
no code implementations • 4 Feb 2022 • Oskar Wysocki, Zili Zhou, Paul O'Regan, Deborah Ferreira, Magdalena Wysocka, Dónal Landers, André Freitas
Specialised transformers-based models (such as BioBERT and BioMegatron) are adapted for the biomedical domain based on publicly available biomedical corpora.
no code implementations • 16 Jul 2021 • Oskar Wysocki, Malina Florea, Donal Landers, Andre Freitas
This paper proposes a novel statistical corpus analysis framework targeted towards the interpretation of Natural Language Processing (NLP) architectural patterns at scale.
no code implementations • EMNLP (Eval4NLP) 2021 • Oskar Wysocki, Malina Florea, Andre Freitas
SemEval is the primary venue in the NLP community for the proposal of new challenges and for the systematic empirical evaluation of NLP systems.