2 code implementations • 21 Oct 2024 • Mehdi Yazdani-Jahromi, Ali Khodabandeh Yalabadi, Amirarsalan Rajabi, Aida Tayebi, Ivan Garibay, Ozlem Ozmen Garibay
The persistent challenge of bias in machine learning models necessitates robust solutions to ensure parity and equal treatment across diverse groups, particularly in classification tasks.
1 code implementation • 15 Oct 2024 • Md Kowsher, Md. Shohanur Islam Sobuj, Nusrat Jahan Prottasha, E. Alejandro Alanis, Ozlem Ozmen Garibay, Niloofar Yousefi
Time series forecasting remains a challenging task, particularly in the context of complex multiscale temporal patterns.
no code implementations • 11 Oct 2024 • Nusrat Jahan Prottasha, Asif Mahmud, Md. Shohanur Islam Sobuj, Prakash Bhat, Md Kowsher, Niloofar Yousefi, Ozlem Ozmen Garibay
This method involves using a fixed LLM to understand and process the semantic content of the prompt through zero-shot capabilities.
1 code implementation • 4 Nov 2023 • Ali Khodabandeh Yalabadi, Mehdi Yazdani-Jahromi, Niloofar Yousefi, Aida Tayebi, Sina Abdidizaji, Ozlem Ozmen Garibay
Drug-Target Interaction (DTI) prediction is vital for drug discovery, yet challenges persist in achieving model interpretability and optimizing performance.
no code implementations • 18 Sep 2022 • Amirarsalan Rajabi, Mehdi Yazdani-Jahromi, Ozlem Ozmen Garibay, Gita Sukthankar
In this study, we present a fast and effective model to de-bias an image dataset through reconstruction and minimizing the statistical dependence between intended variables.
1 code implementation • Briefings in Bioinformatics 2022 • Mehdi Yazdani-Jahromi, Niloofar Yousefi, Aida Tayebi, Elayaraja Kolanthai, Craig J Neal, Sudipta Seal, Ozlem Ozmen Garibay
In this study, we introduce an interpretable graph-based deep learning prediction model, AttentionSiteDTI, which utilizes protein binding sites along with a self-attention mechanism to address the problem of drug–target interaction prediction.
Ranked #1 on Drug Discovery on BindingDB
1 code implementation • 15 Mar 2022 • Mehdi Yazdani-Jahromi, Amirarsalan Rajabi, Ali Khodabandeh Yalabadi, Aida Tayebi, Ozlem Ozmen Garibay
There is an abundance of evidence suggesting that these models could contain or even amplify the bias present in the data on which they are trained, inherent to their objective function and learning algorithms; Many researchers direct their attention to this issue in different directions, namely, changing data to be statistically independent, adversarial training for restricting the capabilities of a particular competitor who aims to maximize parity, etc.
1 code implementation • 2 Sep 2021 • Amirarsalan Rajabi, Ozlem Ozmen Garibay
In the unconstrained case, i. e. when the model is only trained in the first phase and is only meant to generate accurate data following the same joint probability distribution of the real data, the results show that the model beats state-of-the-art GANs proposed in the literature to produce synthetic tabular data.