Hunting imaging biomarkers in pulmonary fibrosis: Benchmarks of the AIIB23 challenge

1 code implementation • 21 Dec 2023 • Yang Nan, Xiaodan Xing, Shiyi Wang, Zeyu Tang, Federico N Felder, Sheng Zhang, Roberta Eufrasia Ledda, Xiaoliu Ding, Ruiqi Yu, Weiping Liu, Feng Shi, Tianyang Sun, Zehong Cao, Minghui Zhang, Yun Gu, Hanxiao Zhang, Jian Gao, Pingyu Wang, Wen Tang, Pengxin Yu, Han Kang, Junqiang Chen, Xing Lu, Boyu Zhang, Michail Mamalakis, Francesco Prinzi, Gianluca Carlini, Lisa Cuneo, Abhirup Banerjee, Zhaohu Xing, Lei Zhu, Zacharia Mesbah, Dhruv Jain, Tsiry Mayet, Hongyu Yuan, Qing Lyu, Abdul Qayyum, Moona Mazher, Athol Wells, Simon LF Walsh, Guang Yang

The online validation set incorporated 52 HRCT scans from patients with fibrotic lung disease and the offline test set included 140 cases from fibrosis and COVID-19 patients.

Mortality Prediction

Efficient automatic segmentation for multi-level pulmonary arteries: The PARSE challenge

no code implementations • 7 Apr 2023 • Gongning Luo, Kuanquan Wang, Jun Liu, Shuo Li, Xinjie Liang, Xiangyu Li, Shaowei Gan, Wei Wang, Suyu Dong, Wenyi Wang, Pengxin Yu, Enyou Liu, Hongrong Wei, Na Wang, Jia Guo, Huiqi Li, Zhao Zhang, Ziwei Zhao, Na Gao, Nan An, Ashkan Pakzad, Bojidar Rangelov, Jiaqi Dou, Song Tian, Zeyu Liu, Yi Wang, Ampatishan Sivalingam, Kumaradevan Punithakumar, Zhaowen Qiu, Xin Gao

Efficient automatic segmentation of multi-level (i. e. main and branch) pulmonary arteries (PA) in CTPA images plays a significant role in clinical applications.

Segmentation

Multi-site, Multi-domain Airway Tree Modeling (ATM'22): A Public Benchmark for Pulmonary Airway Segmentation

1 code implementation • 10 Mar 2023 • Minghui Zhang, Yangqian Wu, Hanxiao Zhang, Yulei Qin, Hao Zheng, Wen Tang, Corey Arnold, Chenhao Pei, Pengxin Yu, Yang Nan, Guang Yang, Simon Walsh, Dominic C. Marshall, Matthieu Komorowski, Puyang Wang, Dazhou Guo, Dakai Jin, Ya'nan Wu, Shuiqing Zhao, Runsheng Chang, Boyu Zhang, Xing Lv, Abdul Qayyum, Moona Mazher, Qi Su, Yonghuang Wu, Ying'ao Liu, Yufei Zhu, Jiancheng Yang, Ashkan Pakzad, Bojidar Rangelov, Raul San Jose Estepar, Carlos Cano Espinosa, Jiayuan Sun, Guang-Zhong Yang, Yun Gu

In recent years, new methods have extended the reach of pulmonary airway segmentation that is closer to the limit of image resolution.

MMMNA-Net for Overall Survival Time Prediction of Brain Tumor Patients

1 code implementation • 13 Jun 2022 • Wen Tang, Haoyue Zhang, Pengxin Yu, Han Kang, Rongguo Zhang

Several deep learning-based methods are proposed for the OS time prediction on multi-modal MRI problems.

RPLHR-CT Dataset and Transformer Baseline for Volumetric Super-Resolution from CT Scans

1 code implementation • 13 Jun 2022 • Pengxin Yu, Haoyue Zhang, Han Kang, Wen Tang, Corey W. Arnold, Rongguo Zhang

In clinical practice, anisotropic volumetric medical images with low through-plane resolution are commonly used due to short acquisition time and lower storage cost.

Medical Diagnosis SSIM +1

Transformer Lesion Tracker

1 code implementation • 13 Jun 2022 • Wen Tang, Han Kang, Haoyue Zhang, Pengxin Yu, Corey W. Arnold, Rongguo Zhang

Previous methods typically lack the integration of local and global information.