Search Results for author: Pheng Ann Heng

Found 22 papers, 9 papers with code

Unveiling the Generalization Power of Fine-Tuned Large Language Models

1 code implementation14 Mar 2024 Haoran Yang, Yumeng Zhang, Jiaqi Xu, Hongyuan Lu, Pheng Ann Heng, Wai Lam

While Large Language Models (LLMs) have demonstrated exceptional multitasking abilities, fine-tuning these models on downstream, domain-specific datasets is often necessary to yield superior performance on test sets compared to their counterparts without fine-tuning.

In-Context Learning

An Autonomous Large Language Model Agent for Chemical Literature Data Mining

no code implementations20 Feb 2024 Kexin Chen, Hanqun Cao, Junyou Li, Yuyang Du, Menghao Guo, Xin Zeng, Lanqing Li, Jiezhong Qiu, Pheng Ann Heng, Guangyong Chen

The proposed approach marks a significant advancement in automating chemical literature extraction and demonstrates the potential for AI to revolutionize data management and utilization in chemistry.

Drug Discovery Language Modelling +2

DLTTA: Dynamic Learning Rate for Test-time Adaptation on Cross-domain Medical Images

1 code implementation27 May 2022 Hongzheng Yang, Cheng Chen, Meirui Jiang, Quande Liu, Jianfeng Cao, Pheng Ann Heng, Qi Dou

Based on this estimated discrepancy, a dynamic learning rate adjustment strategy is then developed to achieve a suitable degree of adaptation for each test sample.

Histopathological Image Classification Image Classification +2

Federated Learning Enables Big Data for Rare Cancer Boundary Detection

1 code implementation22 Apr 2022 Sarthak Pati, Ujjwal Baid, Brandon Edwards, Micah Sheller, Shih-han Wang, G Anthony Reina, Patrick Foley, Alexey Gruzdev, Deepthi Karkada, Christos Davatzikos, Chiharu Sako, Satyam Ghodasara, Michel Bilello, Suyash Mohan, Philipp Vollmuth, Gianluca Brugnara, Chandrakanth J Preetha, Felix Sahm, Klaus Maier-Hein, Maximilian Zenk, Martin Bendszus, Wolfgang Wick, Evan Calabrese, Jeffrey Rudie, Javier Villanueva-Meyer, Soonmee Cha, Madhura Ingalhalikar, Manali Jadhav, Umang Pandey, Jitender Saini, John Garrett, Matthew Larson, Robert Jeraj, Stuart Currie, Russell Frood, Kavi Fatania, Raymond Y Huang, Ken Chang, Carmen Balana, Jaume Capellades, Josep Puig, Johannes Trenkler, Josef Pichler, Georg Necker, Andreas Haunschmidt, Stephan Meckel, Gaurav Shukla, Spencer Liem, Gregory S Alexander, Joseph Lombardo, Joshua D Palmer, Adam E Flanders, Adam P Dicker, Haris I Sair, Craig K Jones, Archana Venkataraman, Meirui Jiang, Tiffany Y So, Cheng Chen, Pheng Ann Heng, Qi Dou, Michal Kozubek, Filip Lux, Jan Michálek, Petr Matula, Miloš Keřkovský, Tereza Kopřivová, Marek Dostál, Václav Vybíhal, Michael A Vogelbaum, J Ross Mitchell, Joaquim Farinhas, Joseph A Maldjian, Chandan Ganesh Bangalore Yogananda, Marco C Pinho, Divya Reddy, James Holcomb, Benjamin C Wagner, Benjamin M Ellingson, Timothy F Cloughesy, Catalina Raymond, Talia Oughourlian, Akifumi Hagiwara, Chencai Wang, Minh-Son To, Sargam Bhardwaj, Chee Chong, Marc Agzarian, Alexandre Xavier Falcão, Samuel B Martins, Bernardo C A Teixeira, Flávia Sprenger, David Menotti, Diego R Lucio, Pamela Lamontagne, Daniel Marcus, Benedikt Wiestler, Florian Kofler, Ivan Ezhov, Marie Metz, Rajan Jain, Matthew Lee, Yvonne W Lui, Richard McKinley, Johannes Slotboom, Piotr Radojewski, Raphael Meier, Roland Wiest, Derrick Murcia, Eric Fu, Rourke Haas, John Thompson, David Ryan Ormond, Chaitra Badve, Andrew E Sloan, Vachan Vadmal, Kristin Waite, Rivka R Colen, Linmin Pei, Murat AK, Ashok Srinivasan, J Rajiv Bapuraj, Arvind Rao, Nicholas Wang, Ota Yoshiaki, Toshio Moritani, Sevcan Turk, Joonsang Lee, Snehal Prabhudesai, Fanny Morón, Jacob Mandel, Konstantinos Kamnitsas, Ben Glocker, Luke V M Dixon, Matthew Williams, Peter Zampakis, Vasileios Panagiotopoulos, Panagiotis Tsiganos, Sotiris Alexiou, Ilias Haliassos, Evangelia I Zacharaki, Konstantinos Moustakas, Christina Kalogeropoulou, Dimitrios M Kardamakis, Yoon Seong Choi, Seung-Koo Lee, Jong Hee Chang, Sung Soo Ahn, Bing Luo, Laila Poisson, Ning Wen, Pallavi Tiwari, Ruchika Verma, Rohan Bareja, Ipsa Yadav, Jonathan Chen, Neeraj Kumar, Marion Smits, Sebastian R van der Voort, Ahmed Alafandi, Fatih Incekara, Maarten MJ Wijnenga, Georgios Kapsas, Renske Gahrmann, Joost W Schouten, Hendrikus J Dubbink, Arnaud JPE Vincent, Martin J van den Bent, Pim J French, Stefan Klein, Yading Yuan, Sonam Sharma, Tzu-Chi Tseng, Saba Adabi, Simone P Niclou, Olivier Keunen, Ann-Christin Hau, Martin Vallières, David Fortin, Martin Lepage, Bennett Landman, Karthik Ramadass, Kaiwen Xu, Silky Chotai, Lola B Chambless, Akshitkumar Mistry, Reid C Thompson, Yuriy Gusev, Krithika Bhuvaneshwar, Anousheh Sayah, Camelia Bencheqroun, Anas Belouali, Subha Madhavan, Thomas C Booth, Alysha Chelliah, Marc Modat, Haris Shuaib, Carmen Dragos, Aly Abayazeed, Kenneth Kolodziej, Michael Hill, Ahmed Abbassy, Shady Gamal, Mahmoud Mekhaimar, Mohamed Qayati, Mauricio Reyes, Ji Eun Park, Jihye Yun, Ho Sung Kim, Abhishek Mahajan, Mark Muzi, Sean Benson, Regina G H Beets-Tan, Jonas Teuwen, Alejandro Herrera-Trujillo, Maria Trujillo, William Escobar, Ana Abello, Jose Bernal, Jhon Gómez, Joseph Choi, Stephen Baek, Yusung Kim, Heba Ismael, Bryan Allen, John M Buatti, Aikaterini Kotrotsou, Hongwei Li, Tobias Weiss, Michael Weller, Andrea Bink, Bertrand Pouymayou, Hassan F Shaykh, Joel Saltz, Prateek Prasanna, Sampurna Shrestha, Kartik M Mani, David Payne, Tahsin Kurc, Enrique Pelaez, Heydy Franco-Maldonado, Francis Loayza, Sebastian Quevedo, Pamela Guevara, Esteban Torche, Cristobal Mendoza, Franco Vera, Elvis Ríos, Eduardo López, Sergio A Velastin, Godwin Ogbole, Dotun Oyekunle, Olubunmi Odafe-Oyibotha, Babatunde Osobu, Mustapha Shu'aibu, Adeleye Dorcas, Mayowa Soneye, Farouk Dako, Amber L Simpson, Mohammad Hamghalam, Jacob J Peoples, Ricky Hu, Anh Tran, Danielle Cutler, Fabio Y Moraes, Michael A Boss, James Gimpel, Deepak Kattil Veettil, Kendall Schmidt, Brian Bialecki, Sailaja Marella, Cynthia Price, Lisa Cimino, Charles Apgar, Prashant Shah, Bjoern Menze, Jill S Barnholtz-Sloan, Jason Martin, Spyridon Bakas

Although machine learning (ML) has shown promise in numerous domains, there are concerns about generalizability to out-of-sample data.

Boundary Detection Federated Learning

Balancing Accuracy and Fairness for Interactive Recommendation with Reinforcement Learning

no code implementations25 Jun 2021 Weiwen Liu, Feng Liu, Ruiming Tang, Ben Liao, Guangyong Chen, Pheng Ann Heng

Fairness in recommendation has attracted increasing attention due to bias and discrimination possibly caused by traditional recommenders.

Fairness Recommendation Systems +2

Cascaded Robust Learning at Imperfect Labels for Chest X-ray Segmentation

no code implementations5 Apr 2021 Cheng Xue, Qiao Deng, Xiaomeng Li, Qi Dou, Pheng Ann Heng

To deal with the high inter-rater variability, the study of imperfect label has great significance in medical image segmentation tasks.

Image Segmentation Medical Image Segmentation +2

Global Guidance Network for Breast Lesion Segmentation in Ultrasound Images

no code implementations5 Apr 2021 Cheng Xue, Lei Zhu, Huazhu Fu, Xiaowei Hu, Xiaomeng Li, Hai Zhang, Pheng Ann Heng

The BD modules learn additional breast lesion boundary map to enhance the boundary quality of a segmentation result refinement.

Boundary Detection Image Segmentation +3

Semi-supervised Medical Image Classification with Relation-driven Self-ensembling Model

1 code implementation15 May 2020 Quande Liu, Lequan Yu, Luyang Luo, Qi Dou, Pheng Ann Heng

It is a consistency-based method which exploits the unlabeled data by encouraging the prediction consistency of given input under perturbations, and leverages a self-ensembling model to produce high-quality consistency targets for the unlabeled data.

General Classification Multi-Label Image Classification +2

MS-Net: Multi-Site Network for Improving Prostate Segmentation with Heterogeneous MRI Data

2 code implementations9 Feb 2020 Quande Liu, Qi Dou, Lequan Yu, Pheng Ann Heng

However, the prostate MRIs from different sites present heterogeneity due to the differences in scanners and imaging protocols, raising challenges for effective ways of aggregating multi-site data for network training.

Transfer Learning

Unsupervised Bidirectional Cross-Modality Adaptation via Deeply Synergistic Image and Feature Alignment for Medical Image Segmentation

1 code implementation6 Feb 2020 Cheng Chen, Qi Dou, Hao Chen, Jing Qin, Pheng Ann Heng

In this work, we present a novel unsupervised domain adaptation framework, named as Synergistic Image and Feature Alignment (SIFA), to effectively adapt a segmentation network to an unlabeled target domain.

Image Segmentation Medical Image Segmentation +4

Unpaired Multi-modal Segmentation via Knowledge Distillation

1 code implementation6 Jan 2020 Qi Dou, Quande Liu, Pheng Ann Heng, Ben Glocker

We propose a novel learning scheme for unpaired cross-modality image segmentation, with a highly compact architecture achieving superior segmentation accuracy.

Image Segmentation Knowledge Distillation +3

Robust Learning at Noisy Labeled Medical Images: Applied to Skin Lesion Classification

no code implementations23 Jan 2019 Cheng Xue, Qi Dou, Xueying Shi, Hao Chen, Pheng Ann Heng

In this paper, we propose an effective iterative learning framework for noisy-labeled medical image classification, to combat the lacking of high quality annotated medical data.

General Classification Image Classification +3

H-DenseUNet: Hybrid Densely Connected UNet for Liver and Tumor Segmentation from CT Volumes

1 code implementation21 Sep 2017 Xiaomeng Li, Hao Chen, Xiaojuan Qi, Qi Dou, Chi-Wing Fu, Pheng Ann Heng

Our method outperformed other state-of-the-arts on the segmentation results of tumors and achieved very competitive performance for liver segmentation even with a single model.

 Ranked #1 on Liver Segmentation on LiTS2017 (Dice metric)

Automatic Liver And Tumor Segmentation Image Segmentation +4

Learning to Aggregate Ordinal Labels by Maximizing Separating Width

no code implementations ICML 2017 Guangyong Chen, Shengyu Zhang, Di Lin, Hui Huang, Pheng Ann Heng

While crowdsourcing has been a cost and time efficient method to label massive samples, one critical issue is quality control, for which the key challenge is to infer the ground truth from noisy or even adversarial data by various users.

Online Prediction of Dyadic Data with Heterogeneous Matrix Factorization

no code implementations13 Jan 2016 Guangyong Chen, Fengyuan Zhu, Pheng Ann Heng

We further develop a novel online learning approach for Variational inference and use it for the online learning of HeMF, which can efficiently cope with the important large-scale DDP problem.

Collaborative Filtering Variational Inference

An Efficient Statistical Method for Image Noise Level Estimation

no code implementations ICCV 2015 Guangyong Chen, Fengyuan Zhu, Pheng Ann Heng

In this paper, we address the problem of estimating noise level from a single image contaminated by additive zero-mean Gaussian noise.

Denoising Noise Estimation

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