3 code implementations • 13 Jun 2019 • Malav Bateriwala, Pierrick Bourgeat
Proposed CNN based segmentation approaches demonstrate how 2D segmentation using prior slices can provide similar results to 3D segmentation while maintaining good continuity in the 3D dimension and improved speed.
3D Medical Imaging Segmentation 4D Spatio Temporal Semantic Segmentation +3
no code implementations • 7 Sep 2020 • Rodrigo Santa Cruz, Léo Lebrat, Pierrick Bourgeat, Vincent Doré, Jason Dowling, Jurgen Fripp, Clinton Fookes, Olivier Salvado
Brain morphometry from magnetic resonance imaging (MRI) is a consolidated biomarker for many neurodegenerative diseases.
no code implementations • 22 Oct 2020 • Rodrigo Santa Cruz, Leo Lebrat, Pierrick Bourgeat, Clinton Fookes, Jurgen Fripp, Olivier Salvado
Having these limitations in mind, we propose DeepCSR, a 3D deep learning framework for cortical surface reconstruction from MRI.
1 code implementation • NeurIPS 2021 • Leo Lebrat, Rodrigo Santa Cruz, Frederic de Gournay, Darren Fu, Pierrick Bourgeat, Jurgen Fripp, Clinton Fookes, Olivier Salvado
In this paper, we introduce CorticalFlow, a new geometric deep-learning model that, given a 3-dimensional image, learns to deform a reference template towards a targeted object.
no code implementations • 6 Jun 2022 • Léo Lebrat, Rodrigo Santa Cruz, Frédéric de Gournay, Darren Fu, Pierrick Bourgeat, Jurgen Fripp, Clinton Fookes, Olivier Salvado
In this paper we introduce CorticalFlow, a new geometric deep-learning model that, given a 3-dimensional image, learns to deform a reference template towards a targeted object.
no code implementations • 14 Jun 2022 • Rodrigo Santa Cruz, Léo Lebrat, Darren Fu, Pierrick Bourgeat, Jurgen Fripp, Clinton Fookes, Olivier Salvado
Using the state-of-the-art CorticalFlow model as a blueprint, this paper proposes three modifications to improve its accuracy and interoperability with existing surface analysis tools, while not sacrificing its fast inference time and low GPU memory consumption.