Search Results for author: Russ B. Altman

Found 4 papers, 3 papers with code

POPDx: An Automated Framework for Patient Phenotyping across 392,246 Individuals in the UK Biobank Study

1 code implementation23 Aug 2022 Lu Yang, Sheng Wang, Russ B. Altman

We describe a method for phenotype recognition that imputes phenotype codes for all UK Biobank participants.

Patient Phenotyping

Leveraging the Cell Ontology to classify unseen cell types

1 code implementation Nature Communications 2021 Sheng Wang, Angela Oliveira Pisco, Aaron McGeever, Maria Brbic, Marinka Zitnik, Spyros Darmanis, Jure Leskovec, Jim Karkanias, Russ B. Altman

Single cell technologies are rapidly generating large amounts of data that enables us to understand biological systems at single-cell resolution.

ATOM3D: Tasks On Molecules in Three Dimensions

3 code implementations7 Dec 2020 Raphael J. L. Townshend, Martin Vögele, Patricia Suriana, Alexander Derry, Alexander Powers, Yianni Laloudakis, Sidhika Balachandar, Bowen Jing, Brandon Anderson, Stephan Eismann, Risi Kondor, Russ B. Altman, Ron O. Dror

We implement several classes of three-dimensional molecular learning methods for each of these tasks and show that they consistently improve performance relative to methods based on one- and two-dimensional representations.

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