no code implementations • 22 Mar 2024 • Victor Ibañez, Przemyslaw Szostak, Quincy Wong, Konstanty Korski, Samaneh Abbasi-Sureshjani, Alvaro Gomariz
The architecture's unique configuration allows for the concurrent modeling of structural patterns at lower magnifications and detailed cellular features at higher ones, while also quantifying the contribution of each magnification level to the prediction.
no code implementations • 29 Nov 2023 • Gustav Bredell, Marcel Fischer, Przemyslaw Szostak, Samaneh Abbasi-Sureshjani, Alvaro Gomariz
Digital pathology has significantly advanced disease detection and pathologist efficiency through the analysis of gigapixel whole-slide images (WSI).
no code implementations • 1 Jun 2022 • Luca Deininger, Bernhard Stimpel, Anil Yuce, Samaneh Abbasi-Sureshjani, Simon Schönenberger, Paolo Ocampo, Konstanty Korski, Fabien Gaire
Due to the sparse availability of annotated whole slide images, we further compared both models pretrained on large amounts of unlabeled whole-slide images using state-of-the-art self-supervised approaches.
no code implementations • 27 Jul 2020 • Sina Amirrajab, Samaneh Abbasi-Sureshjani, Yasmina Al Khalil, Cristian Lorenz, Juergen Weese, Josien Pluim, Marcel Breeuwer
Moreover, the improvement in utilizing synthetic images for augmenting the real data is evident through the reduction of Hausdorff distance up to 28% and an increase in the Dice score up to 5%, indicating a higher similarity to the ground truth in all dimensions.
no code implementations • 20 May 2020 • Samaneh Abbasi-Sureshjani, Ralf Raumanns, Britt E. J. Michels, Gerard Schouten, Veronika Cheplygina
Surprisingly, we found that papers focusing on diagnosis rarely describe the demographics of the datasets used, and the diagnosis is purely based on images.
no code implementations • MIDL 2019 • Samaneh Abbasi-Sureshjani, Sina Amirrajab, Cristian Lorenz, Juergen Weese, Josien Pluim, Marcel Breeuwer
Using the parameterized motion model of the XCAT heart, we generate labels for 25 time frames of the heart for one cardiac cycle at 18 locations for the short axis view.
no code implementations • 20 Oct 2016 • Samaneh Abbasi-Sureshjani, Jiong Zhang, Remco Duits, Bart ter Haar Romeny
We propose to find line co-occurrence statistics from the centerlines of blood vessels in retinal images and show its remarkable similarity to a well-known probabilistic model for the connectivity pattern in the primary visual cortex.
no code implementations • 29 Aug 2016 • Samaneh Abbasi-Sureshjani, Marta Favali, Giovanna Citti, Alessandro Sarti, Bart M. ter Haar Romeny
Tree-like structures such as retinal images are widely studied in computer-aided diagnosis systems for large-scale screening programs.
no code implementations • 21 Dec 2015 • Marta Favali, Samaneh Abbasi-Sureshjani, Bart ter Haar Romeny, Alessandro Sarti
These signs can be investigated based on microaneurysms or smaller vessels.