Search Results for author: Shaoyan Pan

Found 13 papers, 4 papers with code

AnatoMask: Enhancing Medical Image Segmentation with Reconstruction-guided Self-masking

1 code implementation9 Jul 2024 Yuheng Li, Tianyu Luan, Yizhou Wu, Shaoyan Pan, Yenho Chen, Xiaofeng Yang

Due to the scarcity of labeled data, self-supervised learning (SSL) has gained much attention in 3D medical image segmentation, by extracting semantic representations from unlabeled data.

Image Segmentation Medical Image Segmentation +2

Self-Supervised Adversarial Diffusion Models for Fast MRI Reconstruction

no code implementations21 Jun 2024 Mojtaba Safari, Zach Eidex, Shaoyan Pan, Richard L. J. Qiu, Xiaofeng Yang

It achieved the lowest NMSE at R in {4x, 8x}, and the highest PSNR and SSIM values at all acceleration rates for the multi-coil dataset.

compressed sensing MRI Reconstruction +1

Clinically Feasible Diffusion Reconstruction for Highly-Accelerated Cardiac Cine MRI

no code implementations13 Mar 2024 Shihan Qiu, Shaoyan Pan, Yikang Liu, Lin Zhao, Jian Xu, Qi Liu, Terrence Chen, Eric Z. Chen, Xiao Chen, Shanhui Sun

The currently limited quality of accelerated cardiac cine reconstruction may potentially be improved by the emerging diffusion models, but the clinically unacceptable long processing time poses a challenge.

Synthetic CT Generation from MRI using 3D Transformer-based Denoising Diffusion Model

1 code implementation31 May 2023 Shaoyan Pan, Elham Abouei, Jacob Wynne, Tonghe Wang, Richard L. J. Qiu, Yuheng Li, Chih-Wei Chang, Junbo Peng, Justin Roper, Pretesh Patel, David S. Yu, Hui Mao, Xiaofeng Yang

The proposed model consists of two processes: a forward process which adds Gaussian noise to real CT scans, and a reverse process in which a shifted-window transformer V-net (Swin-Vnet) denoises the noisy CT scans conditioned on the MRI from the same patient to produce noise-free CT scans.

Anatomy Denoising +3

Cross-Shaped Windows Transformer with Self-supervised Pretraining for Clinically Significant Prostate Cancer Detection in Bi-parametric MRI

no code implementations30 Apr 2023 Yuheng Li, Jacob Wynne, Jing Wang, Richard L. J. Qiu, Justin Roper, Shaoyan Pan, Ashesh B. Jani, Tian Liu, Pretesh R. Patel, Hui Mao, Xiaofeng Yang

We introduce a novel end-to-end Cross-Shaped windows (CSwin) transformer UNet model, CSwin UNet, to detect clinically significant prostate cancer (csPCa) in prostate bi-parametric MR imaging (bpMRI) and demonstrate the effectiveness of our proposed self-supervised pre-training framework.

Self-Supervised Learning

Cycle-guided Denoising Diffusion Probability Model for 3D Cross-modality MRI Synthesis

no code implementations28 Apr 2023 Shaoyan Pan, Chih-Wei Chang, Junbo Peng, Jiahan Zhang, Richard L. J. Qiu, Tonghe Wang, Justin Roper, Tian Liu, Hui Mao, Xiaofeng Yang

The two DDPMs exchange random latent noise in the reverse processes, which helps to regularize both DDPMs and generate matching images in two modalities.

Denoising Image-to-Image Translation

Advancing Medical Imaging with Language Models: A Journey from N-grams to ChatGPT

no code implementations11 Apr 2023 Mingzhe Hu, Shaoyan Pan, Yuheng Li, Xiaofeng Yang

In this paper, we aimed to provide a review and tutorial for researchers in the field of medical imaging using language models to improve their tasks at hand.

Diagnostic Image Captioning +2

Deep Learning-based Multi-Organ CT Segmentation with Adversarial Data Augmentation

no code implementations25 Feb 2023 Shaoyan Pan, Shao-Yuan Lo, Min Huang, Chaoqiong Ma, Jacob Wynne, Tonghe Wang, Tian Liu, Xiaofeng Yang

In this work, we propose an adversarial attack-based data augmentation method to improve the deep-learning-based segmentation algorithm for the delineation of Organs-At-Risk (OAR) in abdominal Computed Tomography (CT) to facilitate radiation therapy.

Adversarial Attack Computed Tomography (CT) +3

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