1 code implementation • 17 Apr 2023 • Kathryn Wantlin, Chenwei Wu, Shih-Cheng Huang, Oishi Banerjee, Farah Dadabhoy, Veeral Vipin Mehta, Ryan Wonhee Han, Fang Cao, Raja R. Narayan, Errol Colak, Adewole Adamson, Laura Heacock, Geoffrey H. Tison, Alex Tamkin, Pranav Rajpurkar
Finally, we evaluate performance on out-of-distribution data collected at different hospitals than the training data, representing naturally-occurring distribution shifts that frequently degrade the performance of medical AI models.
1 code implementation • 2 Apr 2023 • Alexander Ke, Shih-Cheng Huang, Chloe P O'Connell, Michal Klimont, Serena Yeung, Pranav Rajpurkar
We demonstrate video pretraining improves the average performance of seven 3D models on two chest CT datasets, regardless of finetuning dataset size, and that video pretraining allows 3D models to outperform 2D baselines.
1 code implementation • 8 Feb 2023 • Yuhui Zhang, Shih-Cheng Huang, Zhengping Zhou, Matthew P. Lungren, Serena Yeung
Given the prevalence of 3D medical imaging technologies such as MRI and CT that are widely used in diagnosing and treating diverse diseases, 3D segmentation is one of the fundamental tasks of medical image analysis.
1 code implementation • 8 Feb 2023 • Yuhui Zhang, Jeff Z. HaoChen, Shih-Cheng Huang, Kuan-Chieh Wang, James Zou, Serena Yeung
Our proposed method can discover high-error data slices, identify influential attributes and further rectify undesirable model behaviors, without requiring any visual data.
no code implementations • 2 Dec 2022 • Shih-Cheng Huang, Shih-Heng Wang, Min-Han Shih, Saurav Sahay, Hung-Yi Lee
To tackle these issues, we propose a general framework to enhance the few-shot adaptation and cross-domain generalization ability of parameter-efficient methods.
no code implementations • 8 Jun 2022 • Hsuan Su, PoHan Chi, Shih-Cheng Huang, Chung Ho Lam, Saurav Sahay, Shang-Tse Chen, Hung-Yi Lee
Much literature has shown that prompt-based learning is an efficient method to make use of the large pre-trained language model.
1 code implementation • 17 May 2022 • Rui Yan, Liangqiong Qu, Qingyue Wei, Shih-Cheng Huang, Liyue Shen, Daniel Rubin, Lei Xing, Yuyin Zhou
The collection and curation of large-scale medical datasets from multiple institutions is essential for training accurate deep learning models, but privacy concerns often hinder data sharing.
no code implementations • 23 Nov 2021 • Yuyin Zhou, Shih-Cheng Huang, Jason Alan Fries, Alaa Youssef, Timothy J. Amrhein, Marcello Chang, Imon Banerjee, Daniel Rubin, Lei Xing, Nigam Shah, Matthew P. Lungren
Despite the routine use of electronic health record (EHR) data by radiologists to contextualize clinical history and inform image interpretation, the majority of deep learning architectures for medical imaging are unimodal, i. e., they only learn features from pixel-level information.
no code implementations • 3 Aug 2021 • Anirudh Joshi, Sabri Eyuboglu, Shih-Cheng Huang, Jared Dunnmon, Arjun Soin, Guido Davidzon, Akshay Chaudhari, Matthew P Lungren
FDG PET/CT imaging is a resource intensive examination critical for managing malignant disease and is particularly important for longitudinal assessment during therapy.
no code implementations • 21 Jul 2021 • Imon Banerjee, Ananth Reddy Bhimireddy, John L. Burns, Leo Anthony Celi, Li-Ching Chen, Ramon Correa, Natalie Dullerud, Marzyeh Ghassemi, Shih-Cheng Huang, Po-Chih Kuo, Matthew P Lungren, Lyle Palmer, Brandon J Price, Saptarshi Purkayastha, Ayis Pyrros, Luke Oakden-Rayner, Chima Okechukwu, Laleh Seyyed-Kalantari, Hari Trivedi, Ryan Wang, Zachary Zaiman, Haoran Zhang, Judy W Gichoya
Methods: Using private and public datasets we evaluate: A) performance quantification of deep learning models to detect race from medical images, including the ability of these models to generalize to external environments and across multiple imaging modalities, B) assessment of possible confounding anatomic and phenotype population features, such as disease distribution and body habitus as predictors of race, and C) investigation into the underlying mechanism by which AI models can recognize race.
2 code implementations • ICCV 2021 • Shih-Cheng Huang, Liyue Shen, Matthew P. Lungren, Serena Yeung
In recent years, the growing number of medical imaging studies is placing an ever-increasing burden on radiologists.
2 code implementations • 13 Oct 2018 • Adam Rule, Amanda Birmingham, Cristal Zuniga, Ilkay Altintas, Shih-Cheng Huang, Rob Knight, Niema Moshiri, Mai H. Nguyen, Sara Brin Rosenthal, Fernando Pérez, Peter W. Rose
For example, what are the technical and non-technical barriers to reproducible computational studies?
Other Computer Science Computers and Society