no code implementations • 4 Oct 2023 • Nithya Bhasker, Stefan Leger, Alexander Zwanenburg, Chethan Babu Reddy, Sebastian Bodenstedt, Steffen Löck, Stefanie Speidel
Graph neural networks (GNNs) are becoming increasingly popular in the medical domain for the tasks of disease classification and outcome prediction.
1 code implementation • 29 May 2020 • Micha Pfeiffer, Carina Riediger, Stefan Leger, Jens-Peter Kühn, Danilo Seppelt, Ralf-Thorsten Hoffmann, Jürgen Weitz, Stefanie Speidel
In this work, we train a convolutional neural network to perform both the search for surface correspondences as well as the non-rigid registration in one step.
no code implementations • 23 Mar 2020 • Tobias Ross, Annika Reinke, Peter M. Full, Martin Wagner, Hannes Kenngott, Martin Apitz, Hellena Hempe, Diana Mindroc Filimon, Patrick Scholz, Thuy Nuong Tran, Pierangela Bruno, Pablo Arbeláez, Gui-Bin Bian, Sebastian Bodenstedt, Jon Lindström Bolmgren, Laura Bravo-Sánchez, Hua-Bin Chen, Cristina González, Dong Guo, Pål Halvorsen, Pheng-Ann Heng, Enes Hosgor, Zeng-Guang Hou, Fabian Isensee, Debesh Jha, Tingting Jiang, Yueming Jin, Kadir Kirtac, Sabrina Kletz, Stefan Leger, Zhixuan Li, Klaus H. Maier-Hein, Zhen-Liang Ni, Michael A. Riegler, Klaus Schoeffmann, Ruohua Shi, Stefanie Speidel, Michael Stenzel, Isabell Twick, Gutai Wang, Jiacheng Wang, Liansheng Wang, Lu Wang, Yu-Jie Zhang, Yan-Jie Zhou, Lei Zhu, Manuel Wiesenfarth, Annette Kopp-Schneider, Beat P. Müller-Stich, Lena Maier-Hein
The validation of the competing methods for the three tasks (binary segmentation, multi-instance detection and multi-instance segmentation) was performed in three different stages with an increasing domain gap between the training and the test data.
3 code implementations • 30 Jan 2020 • Max Allan, Satoshi Kondo, Sebastian Bodenstedt, Stefan Leger, Rahim Kadkhodamohammadi, Imanol Luengo, Felix Fuentes, Evangello Flouty, Ahmed Mohammed, Marius Pedersen, Avinash Kori, Varghese Alex, Ganapathy Krishnamurthi, David Rauber, Robert Mendel, Christoph Palm, Sophia Bano, Guinther Saibro, Chi-Sheng Shih, Hsun-An Chiang, Juntang Zhuang, Junlin Yang, Vladimir Iglovikov, Anton Dobrenkii, Madhu Reddiboina, Anubhav Reddy, Xingtong Liu, Cong Gao, Mathias Unberath, Myeonghyeon Kim, Chanho Kim, Chaewon Kim, Hye-Jin Kim, Gyeongmin Lee, Ihsan Ullah, Miguel Luna, Sang Hyun Park, Mahdi Azizian, Danail Stoyanov, Lena Maier-Hein, Stefanie Speidel
In 2015 we began a sub-challenge at the EndoVis workshop at MICCAI in Munich using endoscope images of ex-vivo tissue with automatically generated annotations from robot forward kinematics and instrument CAD models.
no code implementations • 18 Jun 2018 • Alex Zwanenburg, Stefan Leger, Linda Agolli, Karoline Pilz, Esther G. C. Troost, Christian Richter, Steffen Löck
Thus, this perturbation chain may be used to assess feature robustness.
3 code implementations • 21 Dec 2016 • Alex Zwanenburg, Stefan Leger, Martin Vallières, Steffen Löck
The image biomarker standardisation initiative (IBSI) is an independent international collaboration which works towards standardising the extraction of image biomarkers from acquired imaging for the purpose of high-throughput quantitative image analysis (radiomics).