no code implementations • 27 May 2020 • Zhuotun Zhu, Ke Yan, Dakai Jin, Jinzheng Cai, Tsung-Ying Ho, Adam P. Harrison, Dazhou Guo, Chun-Hung Chao, Xianghua Ye, Jing Xiao, Alan Yuille, Le Lu
We focus on the detection and segmentation of oncology-significant (or suspicious cancer metastasized) lymph nodes (OSLNs), which has not been studied before as a computational task.
no code implementations • 27 Aug 2020 • Zhuotun Zhu, Dakai Jin, Ke Yan, Tsung-Ying Ho, Xianghua Ye, Dazhou Guo, Chun-Hung Chao, Jing Xiao, Alan Yuille, Le Lu
Finding, identifying and segmenting suspicious cancer metastasized lymph nodes from 3D multi-modality imaging is a clinical task of paramount importance.
no code implementations • 29 Aug 2020 • Chun-Hung Chao, Zhuotun Zhu, Dazhou Guo, Ke Yan, Tsung-Ying Ho, Jinzheng Cai, Adam P. Harrison, Xianghua Ye, Jing Xiao, Alan Yuille, Min Sun, Le Lu, Dakai Jin
Specifically, we first utilize a 3D convolutional neural network with ROI-pooling to extract the GTV$_{LN}$'s instance-wise appearance features.
no code implementations • 20 Sep 2021 • Dazhou Guo, Xianghua Ye, Jia Ge, Xing Di, Le Lu, Lingyun Huang, Guotong Xie, Jing Xiao, Zhongjie Liu, Ling Peng, Senxiang Yan, Dakai Jin
Lymph node station (LNS) delineation from computed tomography (CT) scans is an indispensable step in radiation oncology workflow.
no code implementations • 23 Sep 2021 • Fengze Liu, Ke Yan, Adam Harrison, Dazhou Guo, Le Lu, Alan Yuille, Lingyun Huang, Guotong Xie, Jing Xiao, Xianghua Ye, Dakai Jin
In this work, we introduce a fast and accurate method for unsupervised 3D medical image registration.
no code implementations • 11 Oct 2021 • Xianghua Ye, Dazhou Guo, Chen-Kan Tseng, Jia Ge, Tsung-Min Hung, Ping-Ching Pai, Yanping Ren, Lu Zheng, Xinli Zhu, Ling Peng, Ying Chen, Xiaohua Chen, Chen-Yu Chou, Danni Chen, Jiaze Yu, Yuzhen Chen, Feiran Jiao, Yi Xin, Lingyun Huang, Guotong Xie, Jing Xiao, Le Lu, Senxiang Yan, Dakai Jin, Tsung-Ying Ho
252 institution-1 patients had a treatment planning-CT (pCT) and a pair of diagnostic FDG-PETCT; 354 patients from other 3 institutions had only pCT.
no code implementations • 1 Nov 2021 • Dazhou Guo, Jia Ge, Xianghua Ye, Senxiang Yan, Yi Xin, Yuchen Song, Bing-shen Huang, Tsung-Min Hung, Zhuotun Zhu, Ling Peng, Yanping Ren, Rui Liu, Gong Zhang, Mengyuan Mao, Xiaohua Chen, Zhongjie Lu, Wenxiang Li, Yuzhen Chen, Lingyun Huang, Jing Xiao, Adam P. Harrison, Le Lu, Chien-Yu Lin, Dakai Jin, Tsung-Ying Ho
Accurate organ at risk (OAR) segmentation is critical to reduce the radiotherapy post-treatment complications.
no code implementations • ICCV 2023 • Zhanghexuan Ji, Dazhou Guo, Puyang Wang, Ke Yan, Le Lu, Minfeng Xu, Qifeng Wang, Jia Ge, Mingchen Gao, Xianghua Ye, Dakai Jin
In this work, we propose a new architectural CSS learning framework to learn a single deep segmentation model for segmenting a total of 143 whole-body organs.
no code implementations • ICCV 2023 • Jieneng Chen, Yingda Xia, Jiawen Yao, Ke Yan, Jianpeng Zhang, Le Lu, Fakai Wang, Bo Zhou, Mingyan Qiu, Qihang Yu, Mingze Yuan, Wei Fang, Yuxing Tang, Minfeng Xu, Jian Zhou, Yuqian Zhao, Qifeng Wang, Xianghua Ye, Xiaoli Yin, Yu Shi, Xin Chen, Jingren Zhou, Alan Yuille, Zaiyi Liu, Ling Zhang
Human readers or radiologists routinely perform full-body multi-organ multi-disease detection and diagnosis in clinical practice, while most medical AI systems are built to focus on single organs with a narrow list of a few diseases.
no code implementations • 1 Feb 2023 • Zhanghexuan Ji, Dazhou Guo, Puyang Wang, Ke Yan, Le Lu, Minfeng Xu, Jingren Zhou, Qifeng Wang, Jia Ge, Mingchen Gao, Xianghua Ye, Dakai Jin
Deep learning empowers the mainstream medical image segmentation methods.
no code implementations • 15 Jun 2023 • Puyang Wang, Dazhou Guo, Dandan Zheng, Minghui Zhang, Haogang Yu, Xin Sun, Jia Ge, Yun Gu, Le Lu, Xianghua Ye, Dakai Jin
Intrathoracic airway segmentation in computed tomography (CT) is a prerequisite for various respiratory disease analyses such as chronic obstructive pulmonary disease (COPD), asthma and lung cancer.
no code implementations • 7 Jul 2023 • Xiaoyu Bai, Fan Bai, Xiaofei Huo, Jia Ge, Tony C. W. Mok, Zi Li, Minfeng Xu, Jingren Zhou, Le Lu, Dakai Jin, Xianghua Ye, JingJing Lu, Ke Yan
We then use this SAM to identify corresponding regions on paired images using robust grid-points matching, followed by a point-set based affine/rigid registration, and a deformable fine-tuning step to produce registered paired images.
1 code implementation • 19 Jul 2023 • Zi Li, Lin Tian, Tony C. W. Mok, Xiaoyu Bai, Puyang Wang, Jia Ge, Jingren Zhou, Le Lu, Xianghua Ye, Ke Yan, Dakai Jin
Estimating displacement vector field via a cost volume computed in the feature space has shown great success in image registration, but it suffers excessive computation burdens.
no code implementations • 20 Jul 2023 • Jianpeng Zhang, Xianghua Ye, Jianfeng Zhang, Yuxing Tang, Minfeng Xu, Jianfei Guo, Xin Chen, Zaiyi Liu, Jingren Zhou, Le Lu, Ling Zhang
In this paper, we propose a radiologist-inspired method to simulate the diagnostic process of radiologists, which is composed of context parsing and prototype recalling modules.
no code implementations • 28 Jul 2023 • Ke Yan, Dakai Jin, Dazhou Guo, Minfeng Xu, Na Shen, Xian-Sheng Hua, Xianghua Ye, Le Lu
Motivated by this observation, we propose a novel end-to-end framework to improve LN detection performance by leveraging their station information.
1 code implementation • 25 Nov 2023 • Xiaoyu Bai, Fan Bai, Xiaofei Huo, Jia Ge, JingJing Lu, Xianghua Ye, Ke Yan, Yong Xia
They use self-supervised learning to acquire a discriminative embedding for each voxel within the image.
1 code implementation • 25 Nov 2023 • Lin Tian, Zi Li, Fengze Liu, Xiaoyu Bai, Jia Ge, Le Lu, Marc Niethammer, Xianghua Ye, Ke Yan, Daikai Jin
In this work, we introduce a fast and accurate method for unsupervised 3D medical image registration building on top of a Self-supervised Anatomical eMbedding (SAM) algorithm, which is capable of computing dense anatomical correspondences between two images at the voxel level.
Ranked #8 on Image Registration on Unpaired-abdomen-CT
no code implementations • 4 Apr 2024 • Qinji Yu, Yirui Wang, Ke Yan, Haoshen Li, Dazhou Guo, Li Zhang, Le Lu, Na Shen, Qifeng Wang, Xiaowei Ding, Xianghua Ye, Dakai Jin
Lymph node (LN) assessment is a critical, indispensable yet very challenging task in the routine clinical workflow of radiology and oncology.
no code implementations • 7 Apr 2024 • Weiwei Cao, Jianpeng Zhang, Yingda Xia, Tony C. W. Mok, Zi Li, Xianghua Ye, Le Lu, Jian Zheng, Yuxing Tang, Ling Zhang
In this paper, we explore the feasibility of leveraging language as a naturally high-quality supervision for chest CT imaging.