Pathological Primitive Segmentation Based on Visual Foundation Model with Zero-Shot Mask Generation

1 code implementation • 12 Apr 2024 • Abu Bakor Hayat Arnob, Xiangxue Wang, Yiping Jiao, Xiao Gan, Wenlong Ming, Jun Xu

Primitive detection and segmentation in digitized tissue samples are essential for objective and automated diagnosis and prognosis of cancer.

Segmentation

Network medicine framework reveals generic herb-symptom effectiveness of Traditional Chinese Medicine

no code implementations • 18 Jul 2022 • Xiao Gan, Zixin Shu, Xinyan Wang, Dengying Yan, Jun Li, Shany ofaim, Réka Albert, XiaoDong Li, Baoyan Liu, Xuezhong Zhou, Albert-László Barabási

We validate our framework with real-world hospital patient data by showing that (1) shorter network distance between symptoms of inpatients correlates with higher relative risk (co-occurrence), and (2) herb-symptom network proximity is indicative of patients' symptom recovery rate after herbal treatment.

Network Medicine Framework for Identifying Drug Repurposing Opportunities for COVID-19

2 code implementations • 15 Apr 2020 • Deisy Morselli Gysi, Ítalo Do Valle, Marinka Zitnik, Asher Ameli, Xiao Gan, Onur Varol, Susan Dina Ghiassian, JJ Patten, Robert Davey, Joseph Loscalzo, Albert-László Barabási

The current pandemic has highlighted the need for methodologies that can quickly and reliably prioritize clinically approved compounds for their potential effectiveness for SARS-CoV-2 infections.