Search Results for author: Xiaochen Bo

Found 4 papers, 2 papers with code

Exploring Optimal Transport-Based Multi-Grained Alignments for Text-Molecule Retrieval

no code implementations4 Nov 2024 Zijun Min, Bingshuai Liu, Liang Zhang, Jia Song, Jinsong Su, Song He, Xiaochen Bo

In this work, we introduce the Optimal TRansport-based Multi-grained Alignments model (ORMA), a novel approach that facilitates multi-grained alignments between textual descriptions and molecules.

Contrastive Learning Cross-Modal Retrieval +2

Towards Cross-Modal Text-Molecule Retrieval with Better Modality Alignment

1 code implementation31 Oct 2024 Jia Song, Wanru Zhuang, Yujie Lin, Liang Zhang, Chunyan Li, Jinsong Su, Song He, Xiaochen Bo

Cross-modal text-molecule retrieval model aims to learn a shared feature space of the text and molecule modalities for accurate similarity calculation, which facilitates the rapid screening of molecules with specific properties and activities in drug design.

Contrastive Learning cross-modal alignment +4

Graph Neural Networks for Double-Strand DNA Breaks Prediction

no code implementations4 Jan 2022 Xu Wang, Huan Zhao, WeiWei Tu, Hao Li, Yu Sun, Xiaochen Bo

Double-strand DNA breaks (DSBs) are a form of DNA damage that can cause abnormal chromosomal rearrangements.

Graph Neural Network

Domain-Adversarial Multi-Task Framework for Novel Therapeutic Property Prediction of Compounds

1 code implementation28 Sep 2018 Lingwei Xie, Song He, Shu Yang, Boyuan Feng, Kun Wan, Zhongnan Zhang, Xiaochen Bo, Yufei Ding

In this paper, we propose a novel domain-adversarial multi-task framework for integrating shared knowledge from multiple domains.

Property Prediction

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