Search Results for author: Yiping Liu

Found 6 papers, 2 papers with code

MoFormer: Multi-objective Antimicrobial Peptide Generation Based on Conditional Transformer Joint Multi-modal Fusion Descriptor

no code implementations3 Jun 2024 Li Wang, Xiangzheng Fu, Jiahao Yang, Xinyi Zhang, Xiucai Ye, Yiping Liu, Tetsuya Sakurai, Xiangxiang Zeng

Deep learning holds a big promise for optimizing existing peptides with more desirable properties, a critical step towards accelerating new drug discovery.

Drug Discovery

Instruction Multi-Constraint Molecular Generation Using a Teacher-Student Large Language Model

1 code implementation20 Mar 2024 Peng Zhou, Jianmin Wang, Chunyan Li, Zixu Wang, Yiping Liu, Siqi Sun, Jianxin Lin, Leyi Wei, Xibao Cai, Houtim Lai, Wei Liu, Longyue Wang, Xiangxiang Zeng

While various models and computational tools have been proposed for structure and property analysis of molecules, generating molecules that conform to all desired structures and properties remains a challenge.

Drug Discovery Knowledge Distillation +2

Learning to Denoise Unreliable Interactions for Link Prediction on Biomedical Knowledge Graph

no code implementations9 Dec 2023 Tengfei Ma, Yujie Chen, Wen Tao, Dashun Zheng, Xuan Lin, Patrick Cheong-lao Pang, Yiping Liu, Yijun Wang, Bosheng Song, Xiangxiang Zeng

By maximizing the mutual information between the reliable structure and smoothed semantic relations, DenoisedLP emphasizes the informative interactions for predicting relation-specific links.

Denoising Drug Discovery +2

Reference Vector Adaptation and Mating Selection Strategy via Adaptive Resonance Theory-based Clustering for Many-objective Optimization

no code implementations22 Apr 2022 Takato Kinoshita, Naoki Masuyama, Yiping Liu, Yusuke Nojima, Hisao Ishibuchi

Decomposition-based multiobjective evolutionary algorithms (MOEAs) with clustering-based reference vector adaptation show good optimization performance for many-objective optimization problems (MaOPs).

Clustering Evolutionary Algorithms

From the Periphery to the Center: Information Brokerage in an Evolving Network

no code implementations2 May 2018 Bo Yan, Yiping Liu, Jiamou Liu, Yijin Cai, Hongyi Su, Hong Zheng

We model integration as the interplay between the newcomer and the dynamics network and capture information brokerage using a process of relationship building.

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